RNA–Protein interactions for RNA: ENST00000465344.1

NUP188-203, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-203ENST00000465344 PLD4Q96BZ4 506 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
NUP188-203ENST00000465344 SEZ6LQ9BYH1 1024 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
NUP188-203ENST00000465344 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 CCDC171Q6TFL3 1326 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 SALL3Q9BXA9 1300 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 SYNRGQ9UMZ2 1314 aa6.68□□□□□ -1.34
NUP188-203ENST00000465344 A0A0D9SFI3 127 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 ARVCFO00192 962 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 FOXP2O15409 715 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 TIMP1P01033 207 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 GHRHP01286 108 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 IGHDP01880 384 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 CALML3P27482 149 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 CST5P28325 142 aaPredicted RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 SMAD3P84022 425 aaKnown RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 BAATQ14032 418 aaPredicted RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 FSCN1Q16658 493 aaKnown RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 IMMTQ16891 758 aaKnown RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 MUM1L1Q5H9M0 696 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 GPATCH4Q5T3I0 446 aaKnown RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 CCSAPQ6IQ19 270 aaPredicted RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 SHISA2Q6UWI4 295 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 BTNL9Q6UXG8 535 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 RNF207Q6ZRF8 634 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 DGKHQ86XP1 1220 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 GPR152Q8TDT2 470 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 SEMA6BQ9H3T3 888 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 KAT14Q9H8E8 782 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 CYP39A1Q9NYL5 469 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 Q9Y3F1 56 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 ZNF536O15090 1300 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 FRMPD2Q68DX3 1309 aaPredicted RBP6.67□□□□□ -1.34
NUP188-203ENST00000465344 DOCK3Q8IZD9 2030 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 PLIN4Q96Q06 1357 aa6.67□□□□□ -1.34
NUP188-203ENST00000465344 NAV1Q8NEY1 1877 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 CDK5RAP2Q96SN8 1893 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 LOC102724159A0A0B4J2E5 919 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 DHX16O60231 1041 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 KIF4AO95239 1232 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 NOVP48745 357 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 CDK7P50613 346 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 BEX3Q00994 111 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 PPIGQ13427 754 aaKnown RBP eCLIP6.66□□□□□ -1.341e-6■□□□□ 9.4
NUP188-203ENST00000465344 ITGA7Q13683 1181 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 PWP2Q15269 919 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 C9orf50Q5SZB4 431 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 PDE12Q6L8Q7 609 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 MFSD5Q6N075 450 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 ZNF589Q86UQ0 364 aaPredicted RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 EXOC6Q8TAG9 804 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 ZKSCAN3Q9BRR0 538 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 UBAC1Q9BSL1 405 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 WDR11Q9BZH6 1224 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 KRT23Q9C075 422 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 UPF3AQ9H1J1 476 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 RANBP17Q9H2T7 1088 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 CNNM2Q9H8M5 875 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 SRA1Q9HD15 236 aaKnown RBP6.66□□□□□ -1.34
NUP188-203ENST00000465344 VTA1Q9NP79 307 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 ZMYM6O95789 1325 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 PLXNB2O15031 1838 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 CEP290O15078 2479 aa6.66□□□□□ -1.34
NUP188-203ENST00000465344 DDX60LQ5H9U9 1706 aaKnown RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 MYADML2A6NDP7 307 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 KPNA6O60684 536 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 DEAF1O75398 565 aaPredicted RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 FGBP02675 491 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 PARP1P09874 1014 aaKnown RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 SUPT20HL2P0C7V6 817 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 GOLGA8HP0CJ92 632 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 PDHBP11177 359 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 ITGB8P26012 769 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 CPT1AP50416 773 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 NKX3-2P78367 333 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 ZNF543Q08ER8 600 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 TRDNQ13061 729 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 DUSP28Q4G0W2 176 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 TAPT1Q6NXT6 567 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 CXCL17Q6UXB2 119 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 TLK2Q86UE8 772 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 MCF2L2Q86YR7 1114 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 FBXO16Q8IX29 292 aaPredicted RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 RPUSD2Q8IZ73 545 aaKnown RBP6.65□□□□□ -1.34
NUP188-203ENST00000465344 RGS22Q8NE09 1264 aa6.65□□□□□ -1.34
NUP188-203ENST00000465344 RUFY2Q8WXA3 655 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms