RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 VPS13AQ96RL7 3174 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 COL1A2P08123 1366 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 C9IYK1 514 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 M0QZ92 97 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 NRIP1P48552 1158 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 MRE11P49959 708 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 RBM10P98175 930 aaKnown RBP12.48□□□□□ -0.41
COL11A1-207ENST00000465209 KRT76Q01546 638 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 EXOSC10Q01780 885 aaKnown RBP12.48□□□□□ -0.41
COL11A1-207ENST00000465209 KCNC3Q14003 757 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 NIPA1Q7RTP0 329 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 ATP8B4Q8TF62 1192 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 SUSD6Q92537 303 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 EDAQ92838 391 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 SDF4Q9BRK5 362 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 RGS18Q9NS28 235 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 TMEM260Q9NX78 707 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
COL11A1-207ENST00000465209 BARX2Q9UMQ3 279 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-207ENST00000465209 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
COL11A1-207ENST00000465209 hCG_1984214I3L0E3 225 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 FSCN2O14926 492 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 ADAMTS3O15072 1205 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 HBP1O60381 514 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 C22orf31O95567 290 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 FOSP01100 380 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 KLRC1P26715 233 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 NAPAP54920 295 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 BMP8AQ7Z5Y6 402 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 ZNF713Q8N859 430 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 CWH43Q9H720 699 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 USP15Q9Y4E8 981 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-207ENST00000465209 CACNA1HO95180 2353 aa12.47□□□□□ -0.41
COL11A1-207ENST00000465209 GPR32O75388 356 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 CDC27P30260 824 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 ADCY7P51828 1080 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 ERVFC1P60507 584 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 FAM189BP81408 668 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 UBE3AQ05086 875 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 DSC3Q14574 896 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 LINC01465Q8N7H1 131 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 PRSS33Q8NF86 280 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 TCEANC2Q96MN5 208 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 ST3GAL5Q9UNP4 418 aa12.46□□□□□ -0.41
COL11A1-207ENST00000465209 NID2Q14112 1375 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 DDX39AO00148 427 aaKnown RBP12.45□□□□□ -0.42
COL11A1-207ENST00000465209 RPS6KA5O75582 802 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 CYP3A4P08684 503 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 NFX1Q12986 1120 aaKnown RBP12.45□□□□□ -0.42
COL11A1-207ENST00000465209 RTN1Q16799 776 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 DUSP6Q16828 381 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 SLC24A5Q71RS6 500 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 RBM23Q86U06 439 aaKnown RBP12.45□□□□□ -0.42
COL11A1-207ENST00000465209 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 COLGALT1Q8NBJ5 622 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 OSMRQ99650 979 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 ADAM2Q99965 735 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF302Q9NR11 478 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 TLR9Q9NR96 1032 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 PCDHB7Q9Y5E2 793 aa12.45□□□□□ -0.42
COL11A1-207ENST00000465209 MAFBQ9Y5Q3 323 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-207ENST00000465209 TMEM221A6NGB7 291 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 M0R296 226 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 PER2O15055 1255 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ZBTB43O43298 467 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 EDIL3O43854 480 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 FGF18O76093 207 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 FGFR1P11362 822 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 RCAN1P53805 252 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ZXDAP98168 799 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 KIZQ2M2Z5 673 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 ZNF484Q5JVG2 852 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 IER5LQ5T953 404 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 TMEM184AQ6ZMB5 413 aa12.44□□□□□ -0.42
COL11A1-207ENST00000465209 LRRC55Q6ZSA7 311 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms