RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 ZNF484Q5JVG2 852 aa28.4■■■□□ 2.14
PAXBP1-206ENST00000464256 ZNF618Q5T7W0 954 aa28.4■■■□□ 2.14
PAXBP1-206ENST00000464256 PIGOQ8TEQ8 1089 aa28.4■■■□□ 2.14
PAXBP1-206ENST00000464256 FAM167AQ96KS9 214 aa28.4■■■□□ 2.14
PAXBP1-206ENST00000464256 COL1A2P08123 1366 aa28.4■■■□□ 2.14
PAXBP1-206ENST00000464256 ANP32AP39687 249 aaKnown RBP28.39■■■□□ 2.14
PAXBP1-206ENST00000464256 C4orf19Q8IY42 314 aa28.39■■■□□ 2.14
PAXBP1-206ENST00000464256 ZSWIM4Q9H7M6 989 aa28.39■■■□□ 2.14
PAXBP1-206ENST00000464256 NRBP2Q9NSY0 501 aa28.39■■■□□ 2.14
PAXBP1-206ENST00000464256 BMP2KQ9NSY1 1161 aaPredicted RBP28.39■■■□□ 2.14
PAXBP1-206ENST00000464256 YWHABP31946 246 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 DNM1Q05193 864 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 TMEM62Q0P6H9 643 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 PDIA5Q14554 519 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 GPNMBQ14956 572 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 ARL6IP4Q66PJ3 421 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 MFSD5Q6N075 450 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 LRRC71Q8N4P6 559 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 GDF15Q99988 308 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 NIFKQ9BYG3 293 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 DRP2Q13474 957 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 MBTPS1Q14703 1052 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 SPECC1Q5M775 1068 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 SNX29Q8TEQ0 813 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 CLIC6Q96NY7 704 aa28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 FBXO2Q9UK22 296 aaPredicted RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 RBM19Q9Y4C8 960 aaKnown RBP28.38■■■□□ 2.13
PAXBP1-206ENST00000464256 PITPNM1O00562 1244 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 IQCF3P0C7M6 154 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 CCT6AP40227 531 aaKnown RBP28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 NASPP49321 788 aaPredicted RBP28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 CLCN3P51790 818 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 CHRDL2Q6WN34 429 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 CEP131Q9UPN4 1083 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 PCDHA2Q9Y5H9 948 aa28.37■■■□□ 2.13
PAXBP1-206ENST00000464256 ACRP10323 421 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 PDIA4P13667 645 aaKnown RBP28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 RPA1P27694 616 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 RBL2Q08999 1139 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 USP49Q70CQ1 688 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 CAGE1Q8TC20 777 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 NEK9Q8TD19 979 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 PPP1R16BQ96T49 567 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 LBHD1Q9BQE6 289 aaPredicted RBP28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 POLR3CQ9BUI4 534 aaPredicted RBP28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 CYP26B1Q9NR63 512 aa28.36■■■□□ 2.13
PAXBP1-206ENST00000464256 BFSP2Q13515 415 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 SLC39A14Q15043 492 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 LRRC8DQ7L1W4 858 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 C16orf59Q7L2K0 433 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 METTL13Q8N6R0 699 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 LINC00301Q8NCQ3 95 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 PLIN2Q99541 437 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 TUFT1Q9NNX1 390 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 BMP15O95972 392 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 SELPP16109 830 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 MKRN4PQ13434 485 aaPredicted RBP28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 ZRSR1Q15695 479 aaKnown RBP28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 PRPF38BQ5VTL8 546 aaKnown RBP28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 DEFB128Q7Z7B8 93 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 KIAA0319LQ8IZA0 1049 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 LINC01465Q8N7H1 131 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 ERMNQ8TAM6 284 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 TNPO1Q92973 898 aaKnown RBP28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 CSRNP2Q9H175 543 aa28.35■■■□□ 2.13
PAXBP1-206ENST00000464256 LYPLA2O95372 231 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 CHRNA1P02708 482 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 FPGSQ05932 587 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 XKR9Q5GH70 373 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 TAF2Q6P1X5 1199 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 KCNK18Q7Z418 384 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 LRRC15Q8TF66 581 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 ZNF668Q96K58 619 aaPredicted RBP28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 CEP170P1Q96L14 293 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 ZNF396Q96N95 335 aaPredicted RBP28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 KIAA1024Q9UPX6 916 aa28.34■■■□□ 2.13
PAXBP1-206ENST00000464256 NBNO60934 754 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 TBC1D8BQ0IIM8 1120 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 STK38Q15208 465 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 TCTN1Q2MV58 587 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 EFCAB12Q6NXP0 572 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 RETREG2Q8NC44 543 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 PNMA5Q96PV4 448 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 RAB34Q9BZG1 259 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 PRO3102Q9H379 93 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 SUGCTQ9HAC7 445 aa28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 DDX19AQ9NUU7 478 aaKnown RBP28.33■■■□□ 2.13
PAXBP1-206ENST00000464256 SMIM35A0A1B0GVV1 85 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 DKC1O60832 514 aaKnown RBP eCLIP28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 VTNP04004 478 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 HAUS3Q68CZ6 603 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 CCDC155Q8N6L0 562 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 CDHR5Q9HBB8 845 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 RARRES1P49788 294 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 MGAT3Q09327 533 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 C9orf50Q5SZB4 431 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 TMEM199Q8N511 208 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 EPSTI1Q96J88 318 aa28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 COLQQ9Y215 455 aaPredicted RBP28.32■■■□□ 2.12
PAXBP1-206ENST00000464256 SRPRBQ9Y5M8 271 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms