RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
SNRNP40-203ENST00000463988 VPS54Q9P1Q0 977 aa16.28■□□□□ 0.2
SNRNP40-203ENST00000463988 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 STAG3L1P0CL83 205 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 CTNNB1P35222 781 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 COL19A1Q14993 1142 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 FAM167AQ96KS9 214 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 RIT2Q99578 217 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 NSUN3Q9H649 340 aaKnown RBP16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.2
SNRNP40-203ENST00000463988 MYO7AQ13402 2215 aa16.27■□□□□ 0.19
SNRNP40-203ENST00000463988 WDR64B1ANS9 1081 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 NCK2O43639 380 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 EDIL3O43854 480 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 C22orf31O95567 290 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 NLRP5P59047 1200 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 NAALADL2Q58DX5 795 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 ZNF710Q8N1W2 664 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 TMX1Q9H3N1 280 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 ERVK-5Q9HDB9 667 aa16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
SNRNP40-203ENST00000463988 CPLX1O14810 134 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 MSH4O15457 936 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 MAGEB2O15479 319 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 DEXIO95424 95 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 KCNA5P22460 613 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 GALNT17Q6IS24 598 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 NEK9Q8TD19 979 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 P2RX5Q93086 422 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 PABPC5Q96DU9 382 aaKnown RBP16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 GABBR1Q9UBS5 961 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
SNRNP40-203ENST00000463988 LOXHD1Q8IVV2 1947 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 CYP3A7-CYP3A51PA0A087WV96 503 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 GPR182O15218 404 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 CYP3A7P24462 503 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 SFNP31947 248 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 SARSP49591 514 aaKnown RBP16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 Q4G0T1 1027 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 DAGLBQ8NCG7 672 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 C1QTNF1Q9BXJ1 281 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 DISC1Q9NRI5 854 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 C1orf112Q9NSG2 853 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 NRBP2Q9NSY0 501 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 GINS2Q9Y248 185 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 NOC2LQ9Y3T9 749 aaKnown RBP16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 SAMM50Q9Y512 469 aa16.24■□□□□ 0.19
SNRNP40-203ENST00000463988 EVPLQ92817 2033 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 M0R2N6 131 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 GRM6O15303 877 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 GAS7O60861 476 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 GPR32O75388 356 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 MMP1P03956 469 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 NEFLP07196 543 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 JAK3P52333 1124 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 TMEM266Q2M3C6 531 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 SLC24A5Q71RS6 500 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 RDM1Q8NG50 284 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 TBCKQ8TEA7 893 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 TMEM40Q8WWA1 233 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 UPF3BQ9BZI7 483 aaKnown RBP16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 RGS18Q9NS28 235 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 LRFN2Q9ULH4 789 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 ST3GAL5Q9UNP4 418 aa16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
SNRNP40-203ENST00000463988 GRXCR2A6NFK2 248 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 ZNF862O60290 1169 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 OATP04181 439 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 TMOD1P28289 359 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 KIZQ2M2Z5 673 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 LRCH2Q5VUJ6 765 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 PTCRAQ6ISU1 281 aaPredicted RBP16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 METTL13Q8N6R0 699 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 LINC01465Q8N7H1 131 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 ADAM2Q99965 735 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 TEKT3Q9BXF9 490 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 PCDHB7Q9Y5E2 793 aa16.22■□□□□ 0.19
SNRNP40-203ENST00000463988 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms