RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PDCP20941 246 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 PTGDRQ13258 359 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 RILPL1Q5EBL4 403 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 C4orf19Q8IY42 314 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 ZNF579Q8NAF0 562 aaKnown RBP19.86■□□□□ 0.77
VPS52-214ENST00000463486 EIF2AK1Q9BQI3 630 aaKnown RBP19.86■□□□□ 0.77
VPS52-214ENST00000463486 LXNQ9BS40 222 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 FAM49AQ9H0Q0 323 aaPredicted RBP19.86■□□□□ 0.77
VPS52-214ENST00000463486 SIP14410 1827 aa19.86■□□□□ 0.77
VPS52-214ENST00000463486 IGKV6-21A0A0C4DH24 114 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 POTEMA6NI47 508 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 ZBTB39O15060 712 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 LYPLA2O95372 231 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 MRPS6P82932 125 aaKnown RBP19.85■□□□□ 0.77
VPS52-214ENST00000463486 CTTNQ14247 550 aaKnown RBP19.85■□□□□ 0.77
VPS52-214ENST00000463486 PLEKHG4Q58EX7 1191 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 HSCBQ8IWL3 235 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 NME8Q8N427 588 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 SH2D3AQ9BRG2 576 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 MTMR6Q9Y217 621 aa19.85■□□□□ 0.77
VPS52-214ENST00000463486 DDX11L8A8MPP1 907 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 MAGEB2O15479 319 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 TECP42680 631 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 FXR2P51116 673 aaKnown RBP eCLIP19.84■□□□□ 0.77
VPS52-214ENST00000463486 CYP4A11Q02928 519 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 LPIN1Q14693 890 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 FBXO47Q5MNV8 452 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 CNKSR3Q6P9H4 555 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 RSPH3Q86UC2 560 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 FERMT3Q86UX7 667 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 DBF4BQ8NFT6 615 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 FTOQ9C0B1 505 aaKnown RBP eCLIP19.84■□□□□ 0.77
VPS52-214ENST00000463486 ZSWIM4Q9H7M6 989 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 CDHR5Q9HBB8 845 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 CDY2AQ9Y6F7 541 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 EVPLQ92817 2033 aa19.84■□□□□ 0.77
VPS52-214ENST00000463486 KDM3AQ9Y4C1 1321 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 RPLP2P05387 115 aaKnown RBP19.83■□□□□ 0.77
VPS52-214ENST00000463486 NPEPPSP55786 919 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 TMEM62Q0P6H9 643 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 RESTQ13127 1097 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 PLA2G4FQ68DD2 849 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 BRAPQ7Z569 592 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 IGSF22Q8N9C0 903 aa19.83■□□□□ 0.77
VPS52-214ENST00000463486 SEPT9Q9UHD8 586 aaPredicted RBP19.83■□□□□ 0.77
VPS52-214ENST00000463486 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 GRXCR1A8MXD5 290 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 LAD1O00515 517 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 GPR32O75388 356 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 MAFO75444 373 aaPredicted RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 MED24O75448 989 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 YWHABP31946 246 aaKnown RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 PRPHP41219 470 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 CLCN3P51790 818 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 SMAD3P84022 425 aaKnown RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 ATP2C1P98194 919 aaPredicted RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 DRP2Q13474 957 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 PDIA5Q14554 519 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 MTERF2Q49AM1 385 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 IER5Q5VY09 327 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 EFCAB12Q6NXP0 572 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 CATSPER3Q86XQ3 398 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 LRRC71Q8N4P6 559 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 CELF4Q9BZC1 486 aaKnown RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 AGO3Q9H9G7 860 aaKnown RBP19.82■□□□□ 0.76
VPS52-214ENST00000463486 CYP26B1Q9NR63 512 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 CDH23Q9H251 3354 aa19.82■□□□□ 0.76
VPS52-214ENST00000463486 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.81■□□□□ 0.76
VPS52-214ENST00000463486 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.81■□□□□ 0.76
VPS52-214ENST00000463486 STX6O43752 255 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 DKC1O60832 514 aaKnown RBP eCLIP19.81■□□□□ 0.76
VPS52-214ENST00000463486 BAIAP3O94812 1187 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 ACTN1P12814 892 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 METTL13Q8N6R0 699 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 NEK9Q8TD19 979 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 POLR3CQ9BUI4 534 aaPredicted RBP19.81■□□□□ 0.76
VPS52-214ENST00000463486 ADAMTS10Q9H324 1103 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 TRPV2Q9Y5S1 764 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 SQORQ9Y6N5 450 aa19.81■□□□□ 0.76
VPS52-214ENST00000463486 A0A087WWV3 80 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 ABHD14A-ACY1A0A1B0GW23 586 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 GHRP10912 638 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 WDR5P61964 334 aaKnown RBP19.8■□□□□ 0.76
VPS52-214ENST00000463486 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 ECM1Q16610 540 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 GPR153Q6NV75 609 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 FAM173BQ6P4H8 233 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 TMEM40Q8WWA1 233 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 DHX33Q9H6R0 707 aaKnown RBP19.8■□□□□ 0.76
VPS52-214ENST00000463486 SLC4A7Q9Y6M7 1214 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 CHD7Q9P2D1 2997 aa19.8■□□□□ 0.76
VPS52-214ENST00000463486 VTNP04004 478 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 XRCC6P12956 609 aaKnown RBP eCLIP19.79■□□□□ 0.76
VPS52-214ENST00000463486 RPA1P27694 616 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 SEPT8Q92599 483 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 MMTAG2Q9BU76 263 aaKnown RBP19.79■□□□□ 0.76
VPS52-214ENST00000463486 IFIH1Q9BYX4 1025 aaKnown RBP19.79■□□□□ 0.76
VPS52-214ENST00000463486 SUGCTQ9HAC7 445 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms