RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 CCDC116Q8IYX3 515 aa5.93□□□□□ -1.46
TRA2B-207ENST00000463328 CPLX3Q8WVH0 158 aa5.93□□□□□ -1.46
TRA2B-207ENST00000463328 CLIP3Q96DZ5 547 aa5.93□□□□□ -1.46
TRA2B-207ENST00000463328 FAM163AQ96GL9 167 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-207ENST00000463328 TRPV4Q9HBA0 871 aa5.93□□□□□ -1.46
TRA2B-207ENST00000463328 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-207ENST00000463328 RPAP1Q9BWH6 1393 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-207ENST00000463328 SLC7A4O43246 635 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 SART1O43290 800 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 KPNA6O60684 536 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 A1BGP04217 495 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 PCCAP05165 728 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 LPOP22079 712 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 NPTX2P47972 431 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 IREB2P48200 963 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 POLD2P49005 469 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 KRT32Q14532 448 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 ANKRD1Q15327 319 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 RNF20Q5VTR2 975 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 SHQ1Q6PI26 577 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 OLFML1Q6UWY5 402 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CWC27Q6UX04 472 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 ATG9AQ7Z3C6 839 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 SLC9B2Q86UD5 537 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 PNMA1Q8ND90 353 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 EPS8L3Q8TE67 593 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 UTP15Q8TED0 518 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 HDAC2Q92769 488 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 ACAD9Q9H845 621 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 DACT1Q9NYF0 836 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 UBAP1Q9NZ09 502 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CDC23Q9UJX2 597 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 FAM184BQ9ULE4 1060 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 TMEM98Q9Y2Y6 226 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 PALLDQ8WX93 1383 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 LACTBL1A8MY62 500 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 COBLO75128 1261 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 SNX4O95219 450 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 GJB6O95452 261 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CYP19A1P11511 503 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 TUBP50607 506 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 AP2B1P63010 937 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 EML3Q32P44 896 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CCDC178Q5BJE1 867 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CNNM4Q6P4Q7 775 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 RUFY3Q7L099 469 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 TMEM110Q86TL2 294 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 VSIG1Q86XK7 387 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 FAM184AQ8NB25 1140 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 ANKK1Q8NFD2 765 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 KCNN1Q92952 543 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CNDP2Q96KP4 475 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 CTNNA3Q9UI47 895 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 DBNLQ9UJU6 430 aaKnown RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 BARX2Q9UMQ3 279 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-207ENST00000463328 MYH3P11055 1940 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 NRAPQ86VF7 1730 aa5.92□□□□□ -1.46
TRA2B-207ENST00000463328 MINDY4BA8MYZ0 360 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 PPEF1O14829 653 aaPredicted RBP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 MBD3O95983 291 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 XRCC6P12956 609 aaKnown RBP eCLIP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 HSD3B1P14060 373 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 ZNF24P17028 368 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 INPP5BP32019 993 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 ID4P47928 161 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 ZNF252P-AS1Q0IIN9 211 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 IFIT5Q13325 482 aaKnown RBP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 SGCGQ13326 291 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 TNIP1Q15025 636 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 SYDE2Q5VT97 1194 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 CNSTQ6PJW8 725 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 LMBR1LQ6UX01 489 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 USP51Q70EK9 711 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 NUP54Q7Z3B4 507 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 DNAJC10Q8IXB1 793 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 SYNPOQ8N3V7 929 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 C2orf69Q8N8R5 385 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 FBXO27Q8NI29 283 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 SLC7A3Q8WY07 619 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 NGLY1Q96IV0 654 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 WDR12Q9GZL7 423 aaKnown RBP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 RABEP2Q9H5N1 569 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 LRRC4BQ9NT99 713 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 STIM2Q9P246 746 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 RIMKLBQ9ULI2 386 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 MAPRE3Q9UPY8 281 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 CYP46A1Q9Y6A2 500 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.91□□□□□ -1.46
TRA2B-207ENST00000463328 SH3TC1Q8TE82 1336 aa5.91□□□□□ -1.46
TRA2B-207ENST00000463328 NUP98P52948 1817 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms