RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 CHRNA1P02708 482 aa13.71□□□□□ -0.21
LINC00879-202ENST00000463200 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
LINC00879-202ENST00000463200 FOSBP53539 338 aa13.71□□□□□ -0.21
LINC00879-202ENST00000463200 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
LINC00879-202ENST00000463200 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.21
LINC00879-202ENST00000463200 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
LINC00879-202ENST00000463200 CELF4Q9BZC1 486 aaKnown RBP13.71□□□□□ -0.21
LINC00879-202ENST00000463200 GINS2Q9Y248 185 aa13.71□□□□□ -0.21
LINC00879-202ENST00000463200 EVPLQ92817 2033 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 PSMD10O75832 226 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 UPP2O95045 317 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 DNM2P50570 870 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 PRKCEQ02156 737 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 MGAT3Q09327 533 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 TBC1D8BQ0IIM8 1120 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 NPY5RQ15761 445 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 KRT40Q6A162 431 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00879-202ENST00000463200 EXOC8Q8IYI6 725 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 ARNTL2Q8WYA1 636 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 MBOAT7Q96N66 472 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
LINC00879-202ENST00000463200 SEPT9Q9UHD8 586 aaPredicted RBP13.7□□□□□ -0.22
LINC00879-202ENST00000463200 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
LINC00879-202ENST00000463200 PTPRSQ13332 1948 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 LOXHD1Q8IVV2 1947 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 GPR182O15218 404 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 JAK2O60674 1132 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
LINC00879-202ENST00000463200 MCM2P49736 904 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 PSMC5P62195 406 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
LINC00879-202ENST00000463200 LPIN1Q14693 890 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 XKR3Q5GH77 459 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 ETNPPLQ8TBG4 499 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 SAMD11Q96NU1 681 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
LINC00879-202ENST00000463200 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
LINC00879-202ENST00000463200 LAMA2P24043 3122 aaKnown RBP13.69□□□□□ -0.22
LINC00879-202ENST00000463200 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 BTBD18B2RXH4 712 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 SLC37A4O43826 429 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 RPS6KA5O75582 802 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 QARSP47897 775 aaKnown RBP13.68□□□□□ -0.22
LINC00879-202ENST00000463200 CRYBB1P53674 252 aaPredicted RBP13.68□□□□□ -0.22
LINC00879-202ENST00000463200 TAP1Q03518 808 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 NR5A1Q13285 461 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 PPP2R5CQ13362 524 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 CALCRLQ16602 461 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 NCAPH2Q6IBW4 605 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
LINC00879-202ENST00000463200 MICALL1Q8N3F8 863 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 TOP1MTQ969P6 601 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
LINC00879-202ENST00000463200 CCDC43Q96MW1 224 aaKnown RBP13.68□□□□□ -0.22
LINC00879-202ENST00000463200 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
LINC00879-202ENST00000463200 SIP14410 1827 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 NEMFO60524 1076 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 DTNBO60941 627 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 C22orf31O95567 290 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
LINC00879-202ENST00000463200 ATP4AP20648 1035 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 CD52P31358 61 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 MTERF2Q49AM1 385 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00879-202ENST00000463200 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 GJA10Q969M2 543 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 KCNMB3Q9NPA1 279 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 PCDHA12Q9UN75 941 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
LINC00879-202ENST00000463200 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 EDIL3O43854 480 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 ZSCAN20P17040 1043 aaPredicted RBP13.66□□□□□ -0.22
LINC00879-202ENST00000463200 ATP2B1P20020 1258 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 GUCY1B3Q02153 619 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 EPHA7Q15375 998 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 SKIV2LQ15477 1246 aaKnown RBP13.66□□□□□ -0.22
LINC00879-202ENST00000463200 FIBCD1Q8N539 461 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 NLRP7Q8WX94 980 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 NIFKQ9BYG3 293 aaKnown RBP13.66□□□□□ -0.22
LINC00879-202ENST00000463200 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
LINC00879-202ENST00000463200 C1orf112Q9NSG2 853 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
LINC00879-202ENST00000463200 PPME1Q9Y570 386 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms