RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 UBA7P41226 1012 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 ME1P48163 572 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 NPEPPSP55786 919 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 PTK7Q13308 1070 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 HYIQ5T013 277 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 CYP26B1Q9NR63 512 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 ANKEF1Q9NU02 776 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
CPNE1-221ENST00000462352 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
CPNE1-221ENST00000462352 TRIM43BA6NCK2 446 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 SLC26A4O43511 780 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 C22orf31O95567 290 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPNE1-221ENST00000462352 MLLT1Q03111 559 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-221ENST00000462352 TBC1D8BQ0IIM8 1120 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 GRB10Q13322 594 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
CPNE1-221ENST00000462352 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 WNT8BQ93098 351 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-221ENST00000462352 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 CDK5RAP3Q96JB5 506 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 PLIN2Q99541 437 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
CPNE1-221ENST00000462352 E9PMD0 336 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 KIAA0355O15063 1070 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 MAGEB2O15479 319 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 RARRES1P49788 294 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 TRIM71Q2Q1W2 868 aaKnown RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 SHC4Q6S5L8 630 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 KCNK18Q7Z418 384 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 NR2E3Q9Y5X4 410 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 KAT6AQ92794 2004 aa13.16□□□□□ -0.3
CPNE1-221ENST00000462352 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-221ENST00000462352 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-221ENST00000462352 EYA4O95677 639 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 SYN1P17600 705 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 PLCG1P19174 1290 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 ITGB8P26012 769 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 TXLNAP40222 546 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 RFC5P40937 340 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 RBL2Q08999 1139 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 BFSP2Q13515 415 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 LRRC71Q8N4P6 559 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 METTL13Q8N6R0 699 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 LINC01465Q8N7H1 131 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 RETREG2Q8NC44 543 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 PPP1R12CQ9BZL4 782 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 FAM49AQ9H0Q0 323 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-221ENST00000462352 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-221ENST00000462352 CCDC39Q9UFE4 941 aa13.15□□□□□ -0.3
CPNE1-221ENST00000462352 TCHHQ07283 1943 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 ARHGEF35A5YM69 484 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 DGAT1O75907 488 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms