RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 ZNF710Q8N1W2 664 aa10.71□□□□□ -0.69
PKP4-208ENST00000462335 FOXD4L4Q8WXT5 416 aaPredicted RBP10.71□□□□□ -0.69
PKP4-208ENST00000462335 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
PKP4-208ENST00000462335 LXNQ9BS40 222 aa10.71□□□□□ -0.69
PKP4-208ENST00000462335 RGL1Q9NZL6 768 aa10.71□□□□□ -0.69
PKP4-208ENST00000462335 VAV3Q9UKW4 847 aa10.71□□□□□ -0.69
PKP4-208ENST00000462335 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
PKP4-208ENST00000462335 IGSF9BQ9UPX0 1349 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 SMIM35A0A1B0GVV1 85 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 YWHABP31946 246 aaKnown RBP10.7□□□□□ -0.7
PKP4-208ENST00000462335 PDIA5Q14554 519 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 NBR1Q14596 966 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 TMEM240Q5SV17 173 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 CNKSR3Q6P9H4 555 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 RUFY4Q6ZNE9 571 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■□□□ 12.4
PKP4-208ENST00000462335 NIFKQ9BYG3 293 aaKnown RBP10.7□□□□□ -0.7
PKP4-208ENST00000462335 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 TMEM60Q9H2L4 133 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 TUFT1Q9NNX1 390 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 TRPV2Q9Y5S1 764 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
PKP4-208ENST00000462335 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 MBLAC1A4D2B0 266 aaPredicted RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 ARHGEF35A5YM69 484 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 POTEMA6NI47 508 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 ZNF862O60290 1169 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 ATP4AP20648 1035 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 TXLNAP40222 546 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 RFC5P40937 340 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 UBA7P41226 1012 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 NFX1Q12986 1120 aaKnown RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 PAK2Q13177 524 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 HIC1Q14526 733 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 UGCGQ16739 394 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 C9orf50Q5SZB4 431 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 C4orf19Q8IY42 314 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 SNX29Q8TEQ0 813 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 HERVK_113Q902F9 699 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 DHX38Q92620 1227 aaKnown RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 CELF4Q9BZC1 486 aaKnown RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 CYP26B1Q9NR63 512 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 RNF216Q9NWF9 866 aaPredicted RBP10.69□□□□□ -0.7
PKP4-208ENST00000462335 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 PPME1Q9Y570 386 aa10.69□□□□□ -0.7
PKP4-208ENST00000462335 ABHD14A-ACY1A0A1B0GW23 586 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 GPR182O15218 404 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 SLITRK3O94933 977 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 AMHP03971 560 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 GHRP10912 638 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 XRCC6P12956 609 aaKnown RBP eCLIP10.68□□□□□ -0.7
PKP4-208ENST00000462335 IBSPP21815 317 aaPredicted RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 HOXC8P31273 242 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 PRPHP41219 470 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
PKP4-208ENST00000462335 CLCN3P51790 818 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 EPHB4P54760 987 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 ADAM17P78536 824 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 RBL2Q08999 1139 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 NCBP1Q09161 790 aaKnown RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 STK38Q15208 465 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 ARL6IP4Q66PJ3 421 aaKnown RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 PLA2G4FQ68DD2 849 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 RPAINQ86UA6 219 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 LRRC71Q8N4P6 559 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 APBB2Q92870 758 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 ZBTB10Q96DT7 871 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 CALML4Q96GE6 196 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 PPP1R16BQ96T49 567 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 POLR3CQ9BUI4 534 aaPredicted RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 INO80BQ9C086 356 aaPredicted RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 ANKEF1Q9NU02 776 aa10.68□□□□□ -0.7
PKP4-208ENST00000462335 SUCLA2Q9P2R7 463 aaPredicted RBP10.68□□□□□ -0.7
PKP4-208ENST00000462335 EVPLQ92817 2033 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 DENND3A2RUS2 1198 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 WNT7AO00755 349 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
PKP4-208ENST00000462335 NBNO60934 754 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 C22orf31O95567 290 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 CHRNA1P02708 482 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 VTNP04004 478 aa10.67□□□□□ -0.7
PKP4-208ENST00000462335 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
PKP4-208ENST00000462335 ATP2A2P16615 1042 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms