RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 KRT25Q7Z3Z0 450 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 TMEM192Q8IY95 271 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 ADAMTS19Q8TE59 1207 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 TBCKQ8TEA7 893 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 TRAPPC12Q8WVT3 735 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 RIT2Q99578 217 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
LDB1-203ENST00000461873 C17orf80Q9BSJ5 609 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 C11orf84Q9BUA3 381 aaPredicted RBP10.01□□□□□ -0.81
LDB1-203ENST00000461873 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 DISC1Q9NRI5 854 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 FAM50BQ9Y247 325 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 ENPP3O14638 875 aa10□□□□□ -0.81
LDB1-203ENST00000461873 NCK2O43639 380 aa10□□□□□ -0.81
LDB1-203ENST00000461873 BAG4O95429 457 aaKnown RBP10□□□□□ -0.81
LDB1-203ENST00000461873 RB1P06400 928 aa10□□□□□ -0.81
LDB1-203ENST00000461873 CIITAP33076 1130 aa10□□□□□ -0.81
LDB1-203ENST00000461873 CDC42EP1Q00587 391 aa10□□□□□ -0.81
LDB1-203ENST00000461873 MGAT3Q09327 533 aa10□□□□□ -0.81
LDB1-203ENST00000461873 TBC1D8BQ0IIM8 1120 aa10□□□□□ -0.81
LDB1-203ENST00000461873 TOB2Q14106 344 aaPredicted RBP10□□□□□ -0.81
LDB1-203ENST00000461873 NTRK3Q16288 839 aa10□□□□□ -0.81
LDB1-203ENST00000461873 TCTN1Q2MV58 587 aa10□□□□□ -0.81
LDB1-203ENST00000461873 LETM2Q2VYF4 491 aa10□□□□□ -0.81
LDB1-203ENST00000461873 MARCH8Q5T0T0 291 aa10□□□□□ -0.81
LDB1-203ENST00000461873 NPAS4Q8IUM7 802 aa10□□□□□ -0.81
LDB1-203ENST00000461873 CCDC60Q8IWA6 550 aaPredicted RBP10□□□□□ -0.81
LDB1-203ENST00000461873 ABI1Q8IZP0 508 aa10□□□□□ -0.81
LDB1-203ENST00000461873 MRPL38Q96DV4 380 aaKnown RBP10□□□□□ -0.81
LDB1-203ENST00000461873 PCYT2Q99447 389 aa10□□□□□ -0.81
LDB1-203ENST00000461873 C1orf112Q9NSG2 853 aa10□□□□□ -0.81
LDB1-203ENST00000461873 DDX25Q9UHL0 483 aaKnown RBP10□□□□□ -0.81
LDB1-203ENST00000461873 PADI3Q9ULW8 664 aa10□□□□□ -0.81
LDB1-203ENST00000461873 ADGRA3Q8IWK6 1321 aa10□□□□□ -0.81
LDB1-203ENST00000461873 SIP14410 1827 aa10□□□□□ -0.81
LDB1-203ENST00000461873 EVPLQ92817 2033 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 IGLV3-22A0A075B6J6 115 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 IGKV6D-21A0A0A0MT36 114 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 EPOPA6NHQ4 379 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 H3BNC9 293 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 CCNE2O96020 404 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 OATP04181 439 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 CRYBB1P53674 252 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 KRT40Q6A162 431 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 EFCAB12Q6NXP0 572 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 EXOC8Q8IYI6 725 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 BANK1Q8NDB2 785 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 RDM1Q8NG50 284 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 NLRP7Q8WX94 980 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 CCDC43Q96MW1 224 aaKnown RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 PPP1R16BQ96T49 567 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 PCDHB12Q9Y5F1 795 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 MAFBQ9Y5Q3 323 aaPredicted RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 IGSF9BQ9UPX0 1349 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
LDB1-203ENST00000461873 PRRC2BQ5JSZ5 2229 aaKnown RBP9.99□□□□□ -0.81
LDB1-203ENST00000461873 LOXHD1Q8IVV2 1947 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 MSH4O15457 936 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 DHX15O43143 795 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 HOXA2O43364 376 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 CCNT1O60563 726 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 ARHGEF15O94989 841 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 GCFC2P16383 781 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 TFF2Q03403 129 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 GNL2Q13823 731 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 SAFBQ15424 915 aaKnown RBP eCLIP9.98□□□□□ -0.81
LDB1-203ENST00000461873 KIZQ2M2Z5 673 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 TMEM266Q2M3C6 531 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 Q4G0T1 1027 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 PAN2Q504Q3 1202 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 CMTR2Q8IYT2 770 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 OSMRQ99650 979 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 PLVAPQ9BX97 442 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 INO80BQ9C086 356 aaPredicted RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 LMAN2LQ9H0V9 348 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 NSUN3Q9H649 340 aaKnown RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 ATP6V0A4Q9HBG4 840 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 ORC3Q9UBD5 711 aaPredicted RBP9.98□□□□□ -0.81
LDB1-203ENST00000461873 ST3GAL5Q9UNP4 418 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 KDM3AQ9Y4C1 1321 aa9.98□□□□□ -0.81
LDB1-203ENST00000461873 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
LDB1-203ENST00000461873 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 DGKIO75912 1065 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 CSPG5O95196 566 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 VTNP04004 478 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 KCNA5P22460 613 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 KRT2P35908 639 aa9.97□□□□□ -0.81
LDB1-203ENST00000461873 BMPR1AP36894 532 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms