RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 XRRA1Q6P2D8 792 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 USP17L6PQ6QN14 398 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
SF3A3-203ENST00000461869 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 FOXP1Q9H334 677 aaPredicted RBP17.55■□□□□ 0.4
SF3A3-203ENST00000461869 EHMT1Q9H9B1 1298 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 BARHL2Q9NY43 387 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
SF3A3-203ENST00000461869 hCG_1642624A0A1W2PR95 340 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 LINC00271P0C7V0 271 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 NCLP19338 710 aaKnown RBP17.54■□□□□ 0.4
SF3A3-203ENST00000461869 U2AF2P26368 475 aaKnown RBP eCLIP17.54■□□□□ 0.46e-7■■■□□ 17.1
SF3A3-203ENST00000461869 KRT2P35908 639 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 TCF7P36402 384 aaPredicted RBP17.54■□□□□ 0.4
SF3A3-203ENST00000461869 MGAT3Q09327 533 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 PPFIA1Q13136 1202 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 LPIN1Q14693 890 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 CLUL1Q15846 466 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 HEATR3Q7Z4Q2 680 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 RSPH3Q86UC2 560 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
SF3A3-203ENST00000461869 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
SF3A3-203ENST00000461869 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 NLRC5Q86WI3 1866 aa17.54■□□□□ 0.4
SF3A3-203ENST00000461869 BAZ2BQ9UIF8 2168 aaKnown RBP17.53■□□□□ 0.4
SF3A3-203ENST00000461869 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 PIK3CDO00329 1044 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 CSPG5O95196 566 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 MARK3P27448 753 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 IRS1P35568 1242 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 NLRP5P59047 1200 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 DLX2Q07687 328 aaPredicted RBP17.53■□□□□ 0.4
SF3A3-203ENST00000461869 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
SF3A3-203ENST00000461869 SMAD2Q15796 467 aaKnown RBP17.53■□□□□ 0.4
SF3A3-203ENST00000461869 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
SF3A3-203ENST00000461869 IGFLR1Q9H665 355 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 GJB4Q9NTQ9 266 aa17.53■□□□□ 0.4
SF3A3-203ENST00000461869 ESYT2A0FGR8 921 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 STXBP3O00186 592 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 MEIS2O14770 477 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 MBTPS2O43462 519 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 ATP9AO75110 1047 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 GNA11P29992 359 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 NAPAP54920 295 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 GRIK4Q16099 956 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 FOXD4L6Q3SYB3 417 aaPredicted RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 FOXD4L3Q6VB84 417 aaPredicted RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 NOSTRINQ8IVI9 506 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 DNAJB3Q8WWF6 145 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 ZNF689Q96CS4 500 aaPredicted RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 KCNH6Q9H252 994 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 RC3H2Q9HBD1 1191 aaKnown RBP17.52■□□□□ 0.4
SF3A3-203ENST00000461869 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 KCNJ14Q9UNX9 436 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 CDY2AQ9Y6F7 541 aa17.52■□□□□ 0.4
SF3A3-203ENST00000461869 DOCK5Q9H7D0 1870 aa17.52■□□□□ 0.39
SF3A3-203ENST00000461869 GSTTP1A0A1W2PQM5 241 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 DGKIO75912 1065 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 KCNA2P16389 499 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 GTF2F1P35269 517 aaKnown RBP eCLIP17.51■□□□□ 0.39
SF3A3-203ENST00000461869 MRE11P49959 708 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 NHLH1Q02575 133 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 TSHZ1Q6ZSZ6 1077 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 GLG1Q92896 1179 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 CDHR1Q96JP9 859 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
SF3A3-203ENST00000461869 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
SF3A3-203ENST00000461869 MBLAC1A4D2B0 266 aaPredicted RBP17.5■□□□□ 0.39
SF3A3-203ENST00000461869 LINC01565O15544 149 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 TBX10O75333 385 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 IGBP1P78318 339 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 SMAD4Q13485 552 aaKnown RBP17.5■□□□□ 0.39
SF3A3-203ENST00000461869 MARCH8Q5T0T0 291 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 HFE2Q6ZVN8 426 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 TEX2Q8IWB9 1127 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 ZMYND12Q9H0C1 365 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 SMARCAD1Q9H4L7 1026 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 C6orf50Q9HD87 102 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 MUTYHQ9UIF7 546 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 CD207Q9UJ71 328 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 PCDHA4Q9UN74 947 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 PLAGL2Q9UPG8 496 aa17.5■□□□□ 0.39
SF3A3-203ENST00000461869 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 ITGB5P18084 799 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 MRPS6P82932 125 aaKnown RBP17.49■□□□□ 0.39
SF3A3-203ENST00000461869 ADAM15Q13444 863 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 SKOR2Q2VWA4 1001 aaPredicted RBP17.49■□□□□ 0.39
SF3A3-203ENST00000461869 RILPL1Q5EBL4 403 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms