RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 HSD17B14Q9BPX1 270 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 RMND1Q9NWS8 449 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 SLC9A2Q9UBY0 812 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 GRIN2DO15399 1336 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 PSAPP07602 524 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 PTGS1P23219 599 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 CPT1AP50416 773 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 ITGA7Q13683 1181 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 TTLL4Q14679 1199 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 SHHQ15465 462 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 CCDC62Q6P9F0 684 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 STAMQ92783 540 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 GSDMAQ96QA5 445 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 NAT10Q9H0A0 1025 aaKnown RBP16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
TMEM39A-203ENST00000461654 A6NJR5 290 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 TLR3O15455 904 aaKnown RBP16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 KPNA6O60684 536 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 SLITRK3O94933 977 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 DPYDQ12882 1025 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 CTTNQ14247 550 aaKnown RBP16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 MCM6Q14566 821 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 FAM109BQ6ICB4 259 aaPredicted RBP16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 MIS18BP1Q6P0N0 1132 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 POTEGQ6S5H5 508 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 BLOC1S4Q9NUP1 217 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 RGL1Q9NZL6 768 aa16.91■□□□□ 0.3
TMEM39A-203ENST00000461654 E9PMD0 336 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 BIN1O00499 593 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 KRT18P05783 430 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 PLA2G4BP0C869 781 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 TXNP10599 105 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 UBA1P22314 1058 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 QARSP47897 775 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 NLRP12P59046 1061 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 FPGSQ05932 587 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 ECM1Q16610 540 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 BRDTQ58F21 947 aaPredicted RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 C9orf50Q5SZB4 431 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 NT5DC1Q5TFE4 455 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 CYFIP1Q7L576 1253 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 BANK1Q8NDB2 785 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 OR6J1Q8NGC5 347 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 ATP6V0A1Q93050 837 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 LXNQ9BS40 222 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 FUCA2Q9BTY2 467 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 BLZF1Q9H2G9 400 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 DACH1Q9UI36 760 aa16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 DDX41Q9UJV9 622 aaKnown RBP16.9■□□□□ 0.3
TMEM39A-203ENST00000461654 EYA4O95677 639 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 GGPS1O95749 300 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 CCNE2O96020 404 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 EPHB4P54760 987 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 ACTR2P61160 394 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 PSMC5P62195 406 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 ASIC1P78348 528 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 SP4Q02446 784 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 CUL4BQ13620 913 aa16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
TMEM39A-203ENST00000461654 LAMA3Q16787 3333 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 BACH1O14867 736 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 ARIH2O95376 493 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 SARSP49591 514 aaKnown RBP16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 SP2Q02086 613 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 ANO6Q4KMQ2 910 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 KCNK18Q7Z418 384 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 SPATA20Q8TB22 786 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 MTRQ99707 1265 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 TRIM9Q9C026 710 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 MAN1B1Q9UKM7 699 aa16.88■□□□□ 0.29
TMEM39A-203ENST00000461654 SZT2Q5T011 3432 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 SORBS3O60504 671 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 LYPLA2O95372 231 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 SUPT20HL2P0C7V6 817 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms