RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 STXBP4Q6ZWJ1 553 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 CRACR2AQ9BSW2 395 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 GANQ9H2C0 597 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 SSU72P8A0A1W2PR75 194 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 HIP1RO75146 1068 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 AMPD2Q01433 879 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 ASTE1Q2TB18 679 aaPredicted RBP22.23■■□□□ 1.15
CCM2-203ENST00000461377 HGSNATQ68CP4 663 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 PADI6Q6TGC4 694 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 DAW1Q8N136 415 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 TSGA10Q9BZW7 698 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 NLRC4Q9NPP4 1024 aa22.23■■□□□ 1.15
CCM2-203ENST00000461377 CLIC2O15247 247 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 XRCC5P13010 732 aaKnown RBP22.22■■□□□ 1.15
CCM2-203ENST00000461377 LMNB1P20700 586 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 QARSP47897 775 aaKnown RBP22.22■■□□□ 1.15
CCM2-203ENST00000461377 CASP4P49662 377 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 POLR2FP61218 127 aaKnown RBP22.22■■□□□ 1.15
CCM2-203ENST00000461377 COG2Q14746 738 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 ODR4Q5SWX8 454 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 SNRNP48Q6IEG0 339 aaKnown RBP22.22■■□□□ 1.15
CCM2-203ENST00000461377 DPY19L2P1Q6NXN4 242 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 SRGAP1Q7Z6B7 1085 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 CEP112Q8N8E3 955 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 STRA6Q9BX79 667 aa22.22■■□□□ 1.15
CCM2-203ENST00000461377 ZNF214Q9UL59 606 aaPredicted RBP22.22■■□□□ 1.15
CCM2-203ENST00000461377 SFMBT2Q5VUG0 894 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 BORCS6Q96GS4 357 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 DEF6Q9H4E7 631 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 PLCB1Q9NQ66 1216 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 PCDHA13Q9Y5I0 950 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 ATP2A1O14983 1001 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 TLR2O60603 784 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 PPP1R37O75864 691 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 APBA1Q02410 837 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 KIF5AQ12840 1032 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 SUPT20HL1Q3ZLR7 823 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 GOLGA1Q92805 767 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 IKZF4Q9H2S9 585 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 SAMM50Q9Y512 469 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 PCDHB13Q9Y5F0 798 aa22.21■■□□□ 1.15
CCM2-203ENST00000461377 AKR1B10O60218 316 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 ATP9AO75110 1047 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 SERPING1P05155 500 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 CCND2P30279 289 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 RARRES1P49788 294 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 JAK3P52333 1124 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 WHAMMP3Q1A5X7 153 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 VSIG10LQ86VR7 867 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCM2-203ENST00000461377 SLC35C1Q96A29 364 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 MKNK1Q9BUB5 465 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 IFIH1Q9BYX4 1025 aaKnown RBP22.2■■□□□ 1.14
CCM2-203ENST00000461377 TMOD4Q9NZQ9 345 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 AFG3L2Q9Y4W6 797 aa22.2■■□□□ 1.14
CCM2-203ENST00000461377 TMEM132BQ14DG7 1078 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 SLC9C1Q4G0N8 1177 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 TEX35Q5T0J7 233 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 KSR1Q8IVT5 923 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 ARID3AQ99856 593 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 MYO6Q9UM54 1294 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 DICER1Q9UPY3 1922 aaKnown RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 USO1O60763 962 aaKnown RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 CCNE2O96020 404 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 MAPTP10636 758 aaKnown RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 SFNP31947 248 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 PSMC2P35998 433 aaKnown RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 CHMP4BP1P59074 171 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 KRT76Q01546 638 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 DCAF17Q5H9S7 520 aaPredicted RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 TRAPPC11Q7Z392 1133 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 C4orf19Q8IY42 314 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 GPR161Q8N6U8 529 aaKnown RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 RABGGTAQ92696 567 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 GPRASP2Q96D09 838 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 AGPAT3Q9NRZ7 376 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 DMAC2Q9NW81 257 aa22.19■■□□□ 1.14
CCM2-203ENST00000461377 COL11A1P12107 1806 aaPredicted RBP22.19■■□□□ 1.14
CCM2-203ENST00000461377 MYPNQ86TC9 1320 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 TESPA1A2RU30 521 aaPredicted RBP22.18■■□□□ 1.14
CCM2-203ENST00000461377 WDR64B1ANS9 1081 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 RBAK-RBAKDNI3L0D1 243 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 NR3C2P08235 984 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 UGCGQ16739 394 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 EXOC3L4Q17RC7 722 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 SH3D19Q5HYK7 790 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 HS2ST1Q7LGA3 356 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 GPIHBP1Q8IV16 184 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 FAM186BQ8IYM0 893 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 GOLGA5Q8TBA6 731 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 GBP3Q9H0R5 595 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 AIPL1Q9NZN9 384 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 DUSP10Q9Y6W6 482 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 SLC9A1P19634 815 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 PON1P27169 355 aa22.18■■□□□ 1.14
CCM2-203ENST00000461377 YWHABP31946 246 aaKnown RBP22.18■■□□□ 1.14
CCM2-203ENST00000461377 PAPD7Q5XG87 772 aaKnown RBP22.18■■□□□ 1.14
CCM2-203ENST00000461377 SECISBP2LQ93073 1101 aaKnown RBP22.18■■□□□ 1.14
CCM2-203ENST00000461377 TEX13BQ9BXU2 312 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms