RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 TRIB2Q92519 343 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 ESR2Q92731 530 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 WNT8BQ93098 351 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 TTC14Q96N46 770 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 APBA2Q99767 749 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 MROH8Q9H579 483 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
NUP50-212ENST00000461194 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
NUP50-212ENST00000461194 FEM1BQ9UK73 627 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 ZNF214Q9UL59 606 aaPredicted RBP8.11□□□□□ -1.11
NUP50-212ENST00000461194 BRCA2P51587 3418 aa8.11□□□□□ -1.11
NUP50-212ENST00000461194 NEDD4P46934 1319 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 SGSM2O43147 1006 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 PLA2G6O60733 806 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 SGPL1O95470 568 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 CTSHP09668 335 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 TOP1P11387 765 aaKnown RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 CAPN2P17655 700 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 MCCP23508 829 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 COPB2P35606 906 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 SLC1A4P43007 532 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 NLRP12P59046 1061 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 MAP3K21Q5TCX8 1036 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 RCSD1Q6JBY9 416 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 FAM160B2Q86V87 743 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 U2AF1L4Q8WU68 220 aaKnown RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 SHISA4Q96DD7 197 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 TMEM47Q9BQJ4 181 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 TEX13BQ9BXU2 312 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 SLC38A10Q9HBR0 1119 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 PAK6Q9NQU5 681 aaPredicted RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 TMEM39AQ9NV64 488 aa8.1□□□□□ -1.11
NUP50-212ENST00000461194 KIAA0100Q14667 2235 aaKnown RBP8.1□□□□□ -1.11
NUP50-212ENST00000461194 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 TMEM232C9JQI7 657 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 COBLO75128 1261 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 ZBED4O75132 1171 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 FCER1AP12319 257 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 ADORA2AP29274 412 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 STAT2P52630 851 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 OAZ1P54368 228 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 PTH1RQ03431 593 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 PPP2R3AQ06190 1150 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 CCL14Q16627 93 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 CCDC178Q5BJE1 867 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 BMP2KLQ5H9B9 411 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 DPP9Q86TI2 863 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 SKAP1Q86WV1 359 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 IQCA1Q86XH1 822 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 DGKHQ86XP1 1220 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 NPLOC4Q8TAT6 608 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 DCAF4Q8WV16 495 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 DEFB118Q96PH6 123 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 KRT23Q9C075 422 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.09□□□□□ -1.11
NUP50-212ENST00000461194 SLC5A4Q9NY91 659 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 FLRT1Q9NZU1 646 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 MYH8P13535 1937 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 RLFQ13129 1914 aa8.09□□□□□ -1.11
NUP50-212ENST00000461194 MGAMO43451 1857 aa8.09□□□□□ -1.12
NUP50-212ENST00000461194 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 B4E1Z4 1266 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 TM4SF5O14894 197 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 CYP21A2P08686 494 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 PDHBP11177 359 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 CACNB2Q08289 660 aaPredicted RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 KCNMA1Q12791 1236 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 KCTD2Q14681 263 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 DUOXA2Q1HG44 320 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 MFSD14CQ5VZR4 134 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 OLFML2BQ68BL8 750 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 SNRNP48Q6IEG0 339 aaKnown RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 KCTD1Q719H9 257 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 CPXCR1Q8N123 301 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 MRRFQ96E11 262 aaKnown RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 MMP19Q99542 508 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 CNNM2Q9H8M5 875 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 RAVER2Q9HCJ3 691 aaKnown RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 ISY1Q9ULR0 285 aaKnown RBP8.08□□□□□ -1.12
NUP50-212ENST00000461194 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 RIPK3Q9Y572 518 aa8.08□□□□□ -1.12
NUP50-212ENST00000461194 CTDP1Q9Y5B0 961 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms