RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 MAGEB2O15479 319 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 KLRC1P26715 233 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 CTTNQ14247 550 aaKnown RBP18.19■□□□□ 0.5
SHANK1-205ENST00000461154 SF3A1Q15459 793 aaKnown RBP18.19■□□□□ 0.5
SHANK1-205ENST00000461154 ZNF618Q5T7W0 954 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 MTHFD1LQ6UB35 978 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 OTUD6AQ7L8S5 288 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 OTOP2Q7RTS6 562 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 RPAINQ86UA6 219 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 VWCEQ96DN2 955 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHANK1-205ENST00000461154 TANC1Q9C0D5 1861 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 TUFT1Q9NNX1 390 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 LRWD1Q9UFC0 647 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 PPME1Q9Y570 386 aa18.19■□□□□ 0.5
SHANK1-205ENST00000461154 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 ZBTB42B2RXF5 422 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 SLITRK3O94933 977 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 F13A1P00488 732 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 IGSF22Q8N9C0 903 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 WNT8BQ93098 351 aa18.18■□□□□ 0.5
SHANK1-205ENST00000461154 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-205ENST00000461154 MYH15Q9Y2K3 1946 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 RSPH10B2B2RC85 870 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 STBD1O95210 358 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 LYPLA2O95372 231 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 C22orf31O95567 290 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 MUTP22033 750 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 RPA1P27694 616 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 TMOD1P28289 359 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 YWHABP31946 246 aaKnown RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 MTERF2Q49AM1 385 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 FAM109BQ6ICB4 259 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 RUFY4Q6ZNE9 571 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 EXOC8Q8IYI6 725 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 NME8Q8N427 588 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 DNAJB3Q8WWF6 145 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 CCDC43Q96MW1 224 aaKnown RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-205ENST00000461154 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
SHANK1-205ENST00000461154 VWA3AA6NCI4 1184 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 M0QZ92 97 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 CXCL10P02778 98 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 FOXD4L5Q5VV16 416 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 KRT79Q5XKE5 535 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 ANO5Q75V66 913 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 METTL13Q8N6R0 699 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 FOXD4L4Q8WXT5 416 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 AK8Q96MA6 479 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 FAM49AQ9H0Q0 323 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 CYP26B1Q9NR63 512 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 CXXC1Q9P0U4 656 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-205ENST00000461154 SLC4A7Q9Y6M7 1214 aa18.16■□□□□ 0.5
SHANK1-205ENST00000461154 NBNO60934 754 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 BAIAP3O94812 1187 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHANK1-205ENST00000461154 CCT6AP40227 531 aaKnown RBP18.15■□□□□ 0.5
SHANK1-205ENST00000461154 PKP1Q13835 747 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 GPNMBQ14956 572 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 IL17AQ16552 155 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 IER5Q5VY09 327 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 CNKSR3Q6P9H4 555 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 CATSPER3Q86XQ3 398 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 SNX29Q8TEQ0 813 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 CEP170P1Q96L14 293 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
SHANK1-205ENST00000461154 TMEM150BA6NC51 233 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 MED24O75448 989 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 BRD1O95696 1058 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 CTSHP09668 335 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 SPATA31C1P0DKV0 1188 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 RFC5P40937 340 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 DNM2P50570 870 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 MRPS6P82932 125 aaKnown RBP18.14■□□□□ 0.49
SHANK1-205ENST00000461154 CEBPZQ03701 1054 aaKnown RBP18.14■□□□□ 0.49
SHANK1-205ENST00000461154 PTPAQ15257 358 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 XKR9Q5GH70 373 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 FAM26DQ5JW98 314 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 PLA2G4FQ68DD2 849 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 ATL3Q6DD88 541 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 EFCAB12Q6NXP0 572 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 ZNF710Q8N1W2 664 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 DEFB123Q8N688 67 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 NACC1Q96RE7 527 aa18.14■□□□□ 0.49
SHANK1-205ENST00000461154 USP28Q96RU2 1077 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms