RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TYW1Q9NV66 732 aaKnown RBP19.74■□□□□ 0.75
TOP3A-202ENST00000461127 DCHS1Q96JQ0 3298 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 CLCN5P51795 746 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 PLCB3Q01970 1234 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 ITIH3Q06033 890 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 APOBRQ0VD83 1088 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 MTMR1Q13613 665 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 FAM102BQ5T8I3 360 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 SLC24A5Q71RS6 500 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 CYB5R4Q7L1T6 521 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 ADAM2Q99965 735 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 PKD2L1Q9P0L9 805 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 GINS2Q9Y248 185 aa19.73■□□□□ 0.75
TOP3A-202ENST00000461127 SMIM35A0A1B0GVV1 85 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 C2CD4DB7Z1M9 353 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 IFIT3O14879 490 aaKnown RBP19.72■□□□□ 0.75
TOP3A-202ENST00000461127 MAFGO15525 162 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 RPS6KA5O75582 802 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 KRT17Q04695 432 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 ATP6V0A4Q9HBG4 840 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 RGS18Q9NS28 235 aa19.72■□□□□ 0.75
TOP3A-202ENST00000461127 MEIS2O14770 477 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 PPM1AP35813 382 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 MTHFRP42898 656 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-202ENST00000461127 SART3Q15020 963 aaKnown RBP19.71■□□□□ 0.75
TOP3A-202ENST00000461127 TMC7Q7Z402 723 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 CATIPQ7Z7H3 387 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 TRAPPC12Q8WVT3 735 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 RRP36Q96EU6 259 aaKnown RBP19.71■□□□□ 0.75
TOP3A-202ENST00000461127 LNPKQ9C0E8 428 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 ADAM7Q9H2U9 754 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 POMKQ9H5K3 350 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 ERVK-5Q9HDB9 667 aa19.71■□□□□ 0.75
TOP3A-202ENST00000461127 JPH1Q9HDC5 661 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-202ENST00000461127 SEC63Q9UGP8 760 aaKnown RBP19.71■□□□□ 0.75
TOP3A-202ENST00000461127 HIDE1A8MVS5 230 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 GPR182O15218 404 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 ITGB5P18084 799 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 TROAPQ12815 778 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 WTAPQ15007 396 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 TDRD5Q8NAT2 981 aaKnown RBP19.7■□□□□ 0.74
TOP3A-202ENST00000461127 TMEM161AQ9NX61 479 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 HCSTQ9UBK5 93 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 SLC9A2Q9UBY0 812 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 DMDP11532 3685 aa19.7■□□□□ 0.74
TOP3A-202ENST00000461127 C9IYK1 514 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 HOXA2O43364 376 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 MGEA5O60502 916 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 PDE4AP27815 886 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 BMS1Q14692 1282 aaKnown RBP19.69■□□□□ 0.74
TOP3A-202ENST00000461127 PLCB4Q15147 1175 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 MTHFD1LQ6UB35 978 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 CENPQQ7L2Z9 268 aaPredicted RBP19.69■□□□□ 0.74
TOP3A-202ENST00000461127 PLPPR4Q7Z2D5 763 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 PLCD3Q8N3E9 789 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 ZNF558Q96NG5 402 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 PCYT2Q99447 389 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 CWH43Q9H720 699 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 ST3GAL5Q9UNP4 418 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
TOP3A-202ENST00000461127 UBIAD1Q9Y5Z9 338 aa19.69■□□□□ 0.74
TOP3A-202ENST00000461127 SPDYE3A6NKU9 549 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 IGHDP01880 384 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 ASGR2P07307 311 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 STAT5BP51692 787 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 SMC1AQ14683 1233 aaKnown RBP19.68■□□□□ 0.74
TOP3A-202ENST00000461127 KCNT2Q6UVM3 1135 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 ZDHHC14Q8IZN3 488 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 FLCNQ8NFG4 579 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 SDF4Q9BRK5 362 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 TMEM117Q9H0C3 514 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 ELAC1Q9H777 363 aaKnown RBP19.68■□□□□ 0.74
TOP3A-202ENST00000461127 PSTPIP2Q9H939 334 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 JADE2Q9NQC1 790 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 CDH22Q9UJ99 828 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 HCFC2Q9Y5Z7 792 aa19.68■□□□□ 0.74
TOP3A-202ENST00000461127 FGFR1P11362 822 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 KIF5BP33176 963 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 SLC26A2P50443 739 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 RALYLQ86SE5 291 aaKnown RBP19.67■□□□□ 0.74
TOP3A-202ENST00000461127 ABI1Q8IZP0 508 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 SPZ1Q9BXG8 430 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 SMOC2Q9H3U7 446 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 SPG21Q9NZD8 308 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 LIMD1Q9UGP4 676 aa19.67■□□□□ 0.74
TOP3A-202ENST00000461127 EP300Q09472 2414 aaPredicted RBP19.67■□□□□ 0.74
TOP3A-202ENST00000461127 KLRC1P26715 233 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 ACTR2P61160 394 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 LRRC43Q8N309 656 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 MRPL43Q8N983 215 aaKnown RBP19.66■□□□□ 0.74
TOP3A-202ENST00000461127 TMEM87AQ8NBN3 555 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 CTCFLQ8NI51 663 aaPredicted RBP19.66■□□□□ 0.74
TOP3A-202ENST00000461127 SENP2Q9HC62 589 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 DBR1Q9UK59 544 aaKnown RBP19.66■□□□□ 0.74
TOP3A-202ENST00000461127 USTQ9Y2C2 406 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 WDR87Q6ZQQ6 2873 aa19.66■□□□□ 0.74
TOP3A-202ENST00000461127 CA8P35219 290 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 FAM189BP81408 668 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 ATAT1Q5SQI0 421 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms