RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PROM2Q8N271 834 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TRIM54Q9BYV2 358 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TOPORSQ9NS56 1045 aaPredicted RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 PLS3P13797 630 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 RANBP1P43487 201 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 EHHADHQ08426 723 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 EIF2B5Q13144 721 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ZC3H12BQ5HYM0 836 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TRMT44Q8IYL2 757 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 GRAMD1AQ96CP6 724 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ING2Q9H160 280 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ATP6V0A4Q9HBG4 840 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 KIAA1586Q9HCI6 787 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 COPB2P35606 906 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 COPB1P53618 953 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TFAMQ00059 246 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 LRRC63Q05C16 580 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MORF4L2Q15014 288 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 FAM47AQ5JRC9 791 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 FBXO18Q8NFZ0 1043 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 IFT43Q96FT9 208 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 EML4Q9HC35 981 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TNKSO95271 1327 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 AP3B1O00203 1094 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 SLC4A1P02730 911 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 GSNP06396 782 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MESDQ14696 234 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 IMPG1Q17R60 797 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 THAP9Q9H5L6 903 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 PARVGQ9HBI0 331 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 HACD3Q9P035 362 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 RWDD2AQ9UIY3 292 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TIMM10P62072 90 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 TOGARAM2Q6ZUX3 1019 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 NEK9Q8TD19 979 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ABHD8Q96I13 439 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 TUBGCP2Q9BSJ2 902 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SUGT1Q9Y2Z0 365 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 LAMB3Q13751 1172 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 CAPRIN1Q14444 709 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 RC3H1Q5TC82 1133 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SRPK1Q96SB4 655 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 NFU1Q9UMS0 254 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 THRAP3Q9Y2W1 955 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 TCP10L2B9ZVM9 353 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ZAP70P43403 619 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 FKBP3Q00688 224 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 DR1Q01658 176 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MAPRE2Q15555 327 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MAML1Q92585 1016 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 OLFM3Q96PB7 478 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SYTL2Q9HCH5 934 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 TARSL2A2RTX5 802 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MXD4Q14582 209 aaPredicted RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 KLHL38Q2WGJ6 581 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 CDC26Q8NHZ8 85 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 GJA10Q969M2 543 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 FAM227BQ96M60 508 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 HEXIM2Q96MH2 286 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 RASSF10A6NK89 507 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MOCS3O95396 460 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ANP32DO95626 131 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ARL4CP56559 192 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 KLHL29Q96CT2 875 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MYH1P12882 1939 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MYH2Q9UKX2 1941 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 MYH4Q9Y623 1939 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SERPING1P05155 500 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 CUL4AQ13619 759 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 CPSF1Q10570 1443 aaKnown RBP9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 ANO9A1A5B4 782 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 KDM1AO60341 852 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 CCT5P48643 541 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 HSPA2P54652 639 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 UBE3CQ15386 1083 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 PHF21AQ96BD5 680 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 SLITRK6Q9H5Y7 841 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 VIPAS39Q9H9C1 493 aa9.5□□□□□ -0.89
SHROOM4-203ENST00000460112 UNC13BO14795 1591 aa9.49□□□□□ -0.89
SHROOM4-203ENST00000460112 NCF2P19878 526 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms