RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
CCDC12-204ENST00000460035 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
CCDC12-204ENST00000460035 SH2D3AQ9BRG2 576 aa12.15□□□□□ -0.46
CCDC12-204ENST00000460035 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-204ENST00000460035 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
CCDC12-204ENST00000460035 NIFKQ9BYG3 293 aaKnown RBP12.15□□□□□ -0.46
CCDC12-204ENST00000460035 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
CCDC12-204ENST00000460035 WRAP73Q9P2S5 460 aaPredicted RBP12.15□□□□□ -0.46
CCDC12-204ENST00000460035 CFAP45Q9UL16 551 aa12.15□□□□□ -0.46
CCDC12-204ENST00000460035 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
CCDC12-204ENST00000460035 TRIOBPQ9H2D6 2365 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 ZBTB42B2RXF5 422 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 SPATA31C1P0DKV0 1188 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 MUTP22033 750 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 ITGB8P26012 769 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 RPA1P27694 616 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
CCDC12-204ENST00000460035 UBA7P41226 1012 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 CCL23P55773 120 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 NPEPPSP55786 919 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 PLA2G4FQ68DD2 849 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 ANO5Q75V66 913 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 DNAJB3Q8WWF6 145 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 DHX38Q92620 1227 aaKnown RBP12.14□□□□□ -0.47
CCDC12-204ENST00000460035 BADQ92934 168 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 CEP170P1Q96L14 293 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CCDC12-204ENST00000460035 SUGCTQ9HAC7 445 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 PCDHA2Q9Y5H9 948 aa12.14□□□□□ -0.47
CCDC12-204ENST00000460035 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 SPTLC2O15270 562 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 MAGEB2O15479 319 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 YEATS4O95619 227 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CKBP12277 381 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 GRIN1Q05586 938 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 TBC1D8BQ0IIM8 1120 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 TARBP2Q15633 366 aaKnown RBP12.13□□□□□ -0.47
CCDC12-204ENST00000460035 TRIM71Q2Q1W2 868 aaKnown RBP12.13□□□□□ -0.47
CCDC12-204ENST00000460035 EFCAB12Q6NXP0 572 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
CCDC12-204ENST00000460035 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 WNT8BQ93098 351 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 SCLYQ96I15 445 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CDK5RAP3Q96JB5 506 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 AK8Q96MA6 479 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 PLIN2Q99541 437 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
CCDC12-204ENST00000460035 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
CCDC12-204ENST00000460035 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
CCDC12-204ENST00000460035 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 GBF1Q92538 1859 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 RSPH10B2B2RC85 870 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 SLC26A4O43511 780 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 CAND2O75155 1236 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 C22orf31O95567 290 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 RPLP2P05387 115 aaKnown RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 RSPH10BP0C881 870 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 SELPP16109 830 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 TMOD1P28289 359 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 MAGEA10P43363 369 aaPredicted RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 TMEM62Q0P6H9 643 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 ECM1Q16610 540 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 ZNF618Q5T7W0 954 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 CABP7Q86V35 215 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 LRRC71Q8N4P6 559 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 CALML4Q96GE6 196 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 MMTAG2Q9BU76 263 aaKnown RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 ANKEF1Q9NU02 776 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
CCDC12-204ENST00000460035 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
CCDC12-204ENST00000460035 SMIM35A0A1B0GVV1 85 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 ARHGEF35A5YM69 484 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 M0QZ92 97 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 PPP6R2O75170 966 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 CTSHP09668 335 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms