RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 EGFRP00533 1210 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 NMT1P30419 496 aaKnown RBP18.3■□□□□ 0.52
CCDC43-202ENST00000457422 VSNL1P62760 191 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 RAPGEF1Q13905 1077 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 MCF2L2Q86YR7 1114 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 SLC35C1Q96A29 364 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 ITGB5P18084 799 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 GUCY2CP25092 1073 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 ITIH3Q06033 890 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 DGKZQ13574 1117 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 SAMD3Q8N6K7 520 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 JDP2Q8WYK2 163 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 BORCS6Q96GS4 357 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 LXNQ9BS40 222 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
CCDC43-202ENST00000457422 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
CCDC43-202ENST00000457422 TARSL2A2RTX5 802 aaKnown RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 CLIC2O15247 247 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 ACTN1P12814 892 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 PON1P27169 355 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 CASP4P49662 377 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 TNIP1Q15025 636 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 TERF2Q15554 542 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 ASIC2Q16515 512 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 DALRD3Q5D0E6 543 aaKnown RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 DCAF17Q5H9S7 520 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 KLHDC7AQ5VTJ3 777 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 IQCEQ6IPM2 695 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 ZNF720Q7Z2F6 126 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 IL31RAQ8NI17 732 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 DDX39AO00148 427 aaKnown RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 UCHL3P15374 230 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 TCP1P17987 556 aaKnown RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 SLC9A1P19634 815 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 MCM3P25205 808 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 RPS12P25398 132 aaKnown RBP18.29■□□□□ 0.52
CCDC43-202ENST00000457422 RASSF7Q02833 373 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 KLHL30Q0D2K2 578 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 NOX5Q96PH1 765 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 IKZF4Q9H2S9 585 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 PKD2L1Q9P0L9 805 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 SALL4Q9UJQ4 1053 aa18.29■□□□□ 0.52
CCDC43-202ENST00000457422 PDE2AO00408 941 aaPredicted RBP18.28■□□□□ 0.52
CCDC43-202ENST00000457422 ZNF185O15231 689 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 ZC2HC1CQ53FD0 456 aaPredicted RBP18.28■□□□□ 0.52
CCDC43-202ENST00000457422 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 HDXQ7Z353 690 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 FAM133AQ8N9E0 248 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 SLC38A10Q9HBR0 1119 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 HYOU1Q9Y4L1 999 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 BZW2Q9Y6E2 419 aaKnown RBP18.28■□□□□ 0.52
CCDC43-202ENST00000457422 PARP14Q460N5 1801 aa18.28■□□□□ 0.52
CCDC43-202ENST00000457422 CTNND1O60716 968 aaKnown RBP18.27■□□□□ 0.52
CCDC43-202ENST00000457422 PSMC2P35998 433 aaKnown RBP18.27■□□□□ 0.52
CCDC43-202ENST00000457422 ARID5AQ03989 594 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 PCNX4Q63HM2 1172 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 IRF2BP2Q7Z5L9 587 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 FAM178BQ8IXR5 827 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 CPXCR1Q8N123 301 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 CAGE1Q8TC20 777 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 RAVER2Q9HCJ3 691 aaKnown RBP18.27■□□□□ 0.52
CCDC43-202ENST00000457422 KCNH7Q9NS40 1196 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 UBIAD1Q9Y5Z9 338 aa18.27■□□□□ 0.52
CCDC43-202ENST00000457422 NFKBIEO00221 500 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 DHX15O43143 795 aaKnown RBP18.27■□□□□ 0.51
CCDC43-202ENST00000457422 ZBTB7AO95365 584 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 ALAS1P13196 640 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 ANXA13P27216 316 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 PRKCIP41743 596 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.51
CCDC43-202ENST00000457422 C10orf76Q5T2E6 689 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 KSR1Q8IVT5 923 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 STRA6Q9BX79 667 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 SIX2Q9NPC8 291 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 DMAC2Q9NW81 257 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 TSKSQ9UJT2 592 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 PNMA2Q9UL42 364 aa18.27■□□□□ 0.51
CCDC43-202ENST00000457422 ATP8B3O60423 1300 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 A0A087X0T9 212 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 PPP1R12BO60237 982 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 FAM228BP0C875 321 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 MAPK7Q13164 816 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 NAB2Q15742 525 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 TCERG1LQ5VWI1 586 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 MIER3Q7Z3K6 550 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms