RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 PAK2Q13177 524 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 NONOQ15233 471 aaKnown RBP eCLIP18.85■□□□□ 0.61
SF3B4-202ENST00000457312 PRR23CQ6ZRP0 262 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
SF3B4-202ENST00000457312 SLC44A3Q8N4M1 653 aa18.85■□□□□ 0.61
SF3B4-202ENST00000457312 ABCB11O95342 1321 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 LRP3O75074 770 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 PPM1AP35813 382 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 PPARAQ07869 468 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 DCLRE1AQ6PJP8 1040 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 PDCD2LQ9BRP1 358 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 TMEM121BQ9BXQ6 578 aaPredicted RBP18.84■□□□□ 0.61
SF3B4-202ENST00000457312 SFXN1Q9H9B4 322 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 TUBE1Q9UJT0 475 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 AKAP13Q12802 2813 aa18.84■□□□□ 0.61
SF3B4-202ENST00000457312 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
SF3B4-202ENST00000457312 MBLAC1A4D2B0 266 aaPredicted RBP18.83■□□□□ 0.6
SF3B4-202ENST00000457312 MGEA5O60502 916 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 APPP05067 770 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 TGFB3P10600 412 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 MYCLP12524 364 aaPredicted RBP18.83■□□□□ 0.6
SF3B4-202ENST00000457312 ZNF543Q08ER8 600 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 LPAL2Q16609 132 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 LETM2Q2VYF4 491 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 KCNT2Q6UVM3 1135 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 IL31RAQ8NI17 732 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 SLC22A17Q8WUG5 538 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 BCO2Q9BYV7 579 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 SEMA4GQ9NTN9 838 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 TELO2Q9Y4R8 837 aa18.83■□□□□ 0.6
SF3B4-202ENST00000457312 GREB1Q4ZG55 1949 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
SF3B4-202ENST00000457312 FGFR1P11362 822 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 GNAT2P19087 354 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 STARD6P59095 220 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 KRT17Q04695 432 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 CEP85Q6P2H3 762 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 CABP7Q86V35 215 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 MCF2L2Q86YR7 1114 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 APPBP2Q92624 585 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 ZNF558Q96NG5 402 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 TMEM47Q9BQJ4 181 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 TRPV2Q9Y5S1 764 aa18.82■□□□□ 0.6
SF3B4-202ENST00000457312 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
SF3B4-202ENST00000457312 CA8P35219 290 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 PPFIA1Q13136 1202 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 PTPN14Q15678 1187 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
SF3B4-202ENST00000457312 UTP14CQ5TAP6 766 aaKnown RBP18.81■□□□□ 0.6
SF3B4-202ENST00000457312 TSSK4Q6SA08 328 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 LRRC55Q6ZSA7 311 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 SLC2A4RGQ9NR83 387 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 EPS15L1Q9UBC2 864 aa18.81■□□□□ 0.6
SF3B4-202ENST00000457312 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.8■□□□□ 0.6
SF3B4-202ENST00000457312 TMEM8BA6NDV4 472 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 CYSRT1A8MQ03 144 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 M0R2C6 588 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
SF3B4-202ENST00000457312 RETP07949 1114 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
SF3B4-202ENST00000457312 GRIK4Q16099 956 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 TMEM266Q2M3C6 531 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 MARCH8Q5T0T0 291 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 IL31Q6EBC2 164 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 GLG1Q92896 1179 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 ZFP91Q96JP5 570 aaPredicted RBP18.8■□□□□ 0.6
SF3B4-202ENST00000457312 CPVLQ9H3G5 476 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 PRMT8Q9NR22 394 aaPredicted RBP18.8■□□□□ 0.6
SF3B4-202ENST00000457312 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
SF3B4-202ENST00000457312 PGM5Q15124 567 aa18.79■□□□□ 0.6
SF3B4-202ENST00000457312 CSRP2Q16527 193 aa18.79■□□□□ 0.6
SF3B4-202ENST00000457312 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
SF3B4-202ENST00000457312 FAM49AQ9H0Q0 323 aaPredicted RBP18.79■□□□□ 0.6
SF3B4-202ENST00000457312 RAB23Q9ULC3 237 aa18.79■□□□□ 0.6
SF3B4-202ENST00000457312 ADAMTS20P59510 1910 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 KANSL1LA0AUZ9 987 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 C9IYK1 514 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 PATL2C9JE40 543 aaKnown RBP18.78■□□□□ 0.6
SF3B4-202ENST00000457312 TM4SF5O14894 197 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 SNHG28P0DPA3 235 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 GBP2P32456 591 aaPredicted RBP18.78■□□□□ 0.6
SF3B4-202ENST00000457312 HSD17B4P51659 736 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 TMEM62Q0P6H9 643 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 SOWAHCQ53LP3 525 aaPredicted RBP18.78■□□□□ 0.6
SF3B4-202ENST00000457312 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 IER5Q5VY09 327 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 CYFIP1Q7L576 1253 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 SLC39A11Q8N1S5 342 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 NXPE3Q969Y0 559 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 DDX23Q9BUQ8 820 aaKnown RBP18.78■□□□□ 0.6
SF3B4-202ENST00000457312 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
SF3B4-202ENST00000457312 MTF2Q9Y483 593 aaPredicted RBP18.78■□□□□ 0.6
SF3B4-202ENST00000457312 OPLAHO14841 1288 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms