RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 KDM3AQ9Y4C1 1321 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 GOLGA8SH3BPF8 625 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 PDE6AP16499 860 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 KRT81Q14533 505 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 HADHQ16836 314 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 TTC7AQ9ULT0 858 aaPredicted RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 UBOX5O94941 541 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 HSD17B3P37058 310 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 RFC5P40937 340 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 STX1BP61266 288 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 NR1H3Q13133 447 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 KCTD21Q4G0X4 260 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 OLFML1Q6UWY5 402 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 GALNT4Q8N4A0 578 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 SPATA17Q96L03 361 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-208ENST00000456173 KIF28PB7ZC32 967 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 USP17L21D6R901 530 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 KCNQ3O43525 872 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ATP9AO75110 1047 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 IFNAR1P17181 557 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ECE1P42892 770 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CPA2P48052 419 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CPP00450 1065 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ATP4AP20648 1035 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 Q4G0T1 1027 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 KDM4CQ9H3R0 1056 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 GYPCP04921 128 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ACTN1P12814 892 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 KCNA4P22459 653 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 TRAPPC10P48553 1259 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ALDH18A1P54886 795 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CCT7Q99832 543 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 DMGDHQ9UI17 866 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CHD1O14646 1710 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 SH2B2O14492 632 aaPredicted RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 TFRCP02786 760 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CCDC137Q6PK04 289 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 PCGF5Q86SE9 256 aa13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-208ENST00000456173 CCNHP51946 323 aaPredicted RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 TRIM16LQ309B1 348 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 PDIK1LQ8N165 341 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 DDHD1Q8NEL9 900 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 CEP72Q9P209 647 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 B2RBV5 119 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 STAM2O75886 525 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 KRT1P04264 644 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 RFX6Q8HWS3 928 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 FAM81AQ8TBF8 368 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 KLHL25Q9H0H3 589 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 DISC1Q9NRI5 854 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 SAMD9Q5K651 1589 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 GOLGA8RI6L899 631 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 RBM26Q5T8P6 1007 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 RINT1Q6NUQ1 792 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 SEPT10Q9P0V9 454 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms