RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MIER3Q7Z3K6 550 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 TMCO2Q7Z6W1 182 aaPredicted RBP19.53■□□□□ 0.72
USP39-208ENST00000455732 SLFN12Q8IYM2 578 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 TRAPPC12Q8WVT3 735 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 PRDM12Q9H4Q4 367 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 SMIM35A0A1B0GVV1 85 aa19.52■□□□□ 0.72
USP39-208ENST00000455732 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
USP39-208ENST00000455732 ZNF862O60290 1169 aa19.52■□□□□ 0.72
USP39-208ENST00000455732 CKAP2LQ8IYA6 745 aa19.52■□□□□ 0.72
USP39-208ENST00000455732 CEP131Q9UPN4 1083 aa19.52■□□□□ 0.72
USP39-208ENST00000455732 REV3LO60673 3130 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 WNT7AO00755 349 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 GJB5O95377 273 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 BAG4O95429 457 aaKnown RBP19.51■□□□□ 0.71
USP39-208ENST00000455732 OATP04181 439 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 PRKCEQ02156 737 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 ORC2Q13416 577 aaPredicted RBP19.51■□□□□ 0.71
USP39-208ENST00000455732 ADGRE1Q14246 886 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 UGCGQ16739 394 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.51■□□□□ 0.71
USP39-208ENST00000455732 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 SEPT8Q92599 483 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 PRRC2BQ5JSZ5 2229 aaKnown RBP19.51■□□□□ 0.71
USP39-208ENST00000455732 TTC3P53804 2025 aa19.51■□□□□ 0.71
USP39-208ENST00000455732 TLL1O43897 1013 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 NEMFO60524 1076 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 C22orf31O95567 290 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
USP39-208ENST00000455732 KLRC1P26715 233 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 TRAPPC10P48553 1259 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 MRPS6P82932 125 aaKnown RBP19.5■□□□□ 0.71
USP39-208ENST00000455732 TAP1Q03518 808 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 SPIRE1Q08AE8 756 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 CUL4AQ13619 759 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 CALCRLQ16602 461 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 NME8Q8N427 588 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 APBB2Q92870 758 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 GAS2L1Q99501 681 aaPredicted RBP19.5■□□□□ 0.71
USP39-208ENST00000455732 IFIH1Q9BYX4 1025 aaKnown RBP19.5■□□□□ 0.71
USP39-208ENST00000455732 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.5■□□□□ 0.71
USP39-208ENST00000455732 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
USP39-208ENST00000455732 LCHNA4D1U4 455 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 EML1O00423 815 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 MARCH6O60337 910 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 GJB2P29033 226 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 LPIN1Q14693 890 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 MTMR9Q96QG7 549 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 FAM49AQ9H0Q0 323 aaPredicted RBP19.49■□□□□ 0.71
USP39-208ENST00000455732 NRBP2Q9NSY0 501 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 KDM3AQ9Y4C1 1321 aa19.49■□□□□ 0.71
USP39-208ENST00000455732 NLRC5Q86WI3 1866 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.48■□□□□ 0.71
USP39-208ENST00000455732 MAGEB2O15479 319 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 GHRP10912 638 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 PSMC5P62195 406 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
USP39-208ENST00000455732 XKR3Q5GH77 459 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 FBXO47Q5MNV8 452 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 IER5Q5VY09 327 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 RAD9AQ99638 391 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 ZBED2Q9BTP6 218 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
USP39-208ENST00000455732 SMC3Q9UQE7 1217 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 SQORQ9Y6N5 450 aa19.48■□□□□ 0.71
USP39-208ENST00000455732 COL4A4P53420 1690 aaPredicted RBP19.48■□□□□ 0.71
USP39-208ENST00000455732 DKC1O60832 514 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP39-208ENST00000455732 STBD1O95210 358 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 AMHP03971 560 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 P4HBP07237 508 aaKnown RBP19.47■□□□□ 0.71
USP39-208ENST00000455732 QARSP47897 775 aaKnown RBP19.47■□□□□ 0.71
USP39-208ENST00000455732 EPHA7Q15375 998 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 TARBP2Q15633 366 aaKnown RBP19.47■□□□□ 0.71
USP39-208ENST00000455732 SPRED2Q7Z698 418 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 KIAA0319LQ8IZA0 1049 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 MYOCDQ8IZQ8 938 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 BANK1Q8NDB2 785 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 TRPV2Q9Y5S1 764 aa19.47■□□□□ 0.71
USP39-208ENST00000455732 SPTBN5Q9NRC6 3674 aaKnown RBP19.47■□□□□ 0.71
USP39-208ENST00000455732 EPOPA6NHQ4 379 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 M0QZ92 97 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 MCM7P33993 719 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
USP39-208ENST00000455732 TSHZ1Q6ZSZ6 1077 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 LINC01465Q8N7H1 131 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 TOP1MTQ969P6 601 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 TMEM60Q9H2L4 133 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 AGO3Q9H9G7 860 aaKnown RBP19.46■□□□□ 0.71
USP39-208ENST00000455732 CERS4Q9HA82 394 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 NOL7Q9UMY1 257 aaKnown RBP19.46■□□□□ 0.71
USP39-208ENST00000455732 PCDHA12Q9UN75 941 aa19.46■□□□□ 0.71
USP39-208ENST00000455732 TMEM62Q0P6H9 643 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 NCAPH2Q6IBW4 605 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 FAM117BQ6P1L5 589 aa19.45■□□□□ 0.7
USP39-208ENST00000455732 TRMT1LQ7Z2T5 733 aaKnown RBP19.45■□□□□ 0.7
USP39-208ENST00000455732 C4orf19Q8IY42 314 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms