RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ZBTB10Q96DT7 871 aa11.99□□□□□ -0.49
SYPL1-202ENST00000455385 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
SYPL1-202ENST00000455385 DACT1Q9NYF0 836 aa11.99□□□□□ -0.49
SYPL1-202ENST00000455385 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
SYPL1-202ENST00000455385 DBR1Q9UK59 544 aaKnown RBP11.99□□□□□ -0.49
SYPL1-202ENST00000455385 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
SYPL1-202ENST00000455385 A0A1W2PQ45 241 aaPredicted RBP11.98□□□□□ -0.49
SYPL1-202ENST00000455385 A0A1W2PQY0 241 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 HBP1O60381 514 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 MTERF2Q49AM1 385 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 XKR9Q5GH70 373 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 OTUD6AQ7L8S5 288 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 KCTD17Q8N5Z5 321 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SYT2Q8N9I0 419 aaPredicted RBP11.98□□□□□ -0.49
SYPL1-202ENST00000455385 DIS3LQ8TF46 1054 aaKnown RBP11.98□□□□□ -0.49
SYPL1-202ENST00000455385 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
SYPL1-202ENST00000455385 CEP170P1Q96L14 293 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 CYP26B1Q9NR63 512 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
SYPL1-202ENST00000455385 KBTBD13C9JR72 458 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 ARSHQ5FYA8 562 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 MARCH8Q5T0T0 291 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 SH3RF1Q7Z6J0 888 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 FAM167AQ96KS9 214 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 RUSC1Q9BVN2 902 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 POLD4Q9HCU8 107 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 KBTBD4Q9NVX7 518 aa11.98□□□□□ -0.49
SYPL1-202ENST00000455385 CABYRO75952 493 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 SSBP05455 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 CASP1P29466 404 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 IGBP1P78318 339 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 ADAM17P78536 824 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 ZNF200P98182 395 aaPredicted RBP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 ITGA7Q13683 1181 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 C1orf186Q6ZWK4 172 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 PAGE5Q96GU1 130 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 GLT1D1Q96MS3 346 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 TRIP12Q14669 1992 aaPredicted RBP11.97□□□□□ -0.49
SYPL1-202ENST00000455385 KAT6AQ92794 2004 aa11.97□□□□□ -0.49
SYPL1-202ENST00000455385 NPHP3-ACAD11A0A0J9YXS1 232 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 ARHGEF35A5YM69 484 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 MYMKA6NI61 221 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 HOXC8P31273 242 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 AFMP43652 599 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 GRIK4Q16099 956 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 ZNF484Q5JVG2 852 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 PADI6Q6TGC4 694 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 SV2BQ7L1I2 683 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 CNNM3Q8NE01 707 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 TIGD1Q96MW7 591 aa11.96□□□□□ -0.49
SYPL1-202ENST00000455385 SENP6Q9GZR1 1112 aaPredicted RBP11.96□□□□□ -0.49
SYPL1-202ENST00000455385 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
SYPL1-202ENST00000455385 COL6A1P12109 1028 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 CYP11B2P19099 503 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 KLRC1P26715 233 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 GPBP1Q86WP2 473 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 CEP57L1Q8IYX8 460 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 C7orf31Q8N865 590 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 PYM1Q9BRP8 204 aaKnown RBP11.96□□□□□ -0.5
SYPL1-202ENST00000455385 CUEDC2Q9H467 287 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 USP25Q9UHP3 1055 aa11.96□□□□□ -0.5
SYPL1-202ENST00000455385 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 USO1O60763 962 aaKnown RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 SOX10P56693 466 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 MAEAQ7L5Y9 396 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 PAWRQ96IZ0 340 aaKnown RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 CTAGE1Q96RT6 745 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 BLZF1Q9H2G9 400 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
SYPL1-202ENST00000455385 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 EVPLQ92817 2033 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 IGKV6-21A0A0C4DH24 114 aa11.95□□□□□ -0.5
SYPL1-202ENST00000455385 TREHO43280 583 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms