RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SEPT9Q9UHD8 586 aaPredicted RBP18.49■□□□□ 0.55
CCDC90B-202ENST00000455220 OGDHLQ9ULD0 1010 aa18.49■□□□□ 0.55
CCDC90B-202ENST00000455220 PPME1Q9Y570 386 aa18.49■□□□□ 0.55
CCDC90B-202ENST00000455220 MYL1P05976 194 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 ASGR1P07306 291 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 NPEPPSP55786 919 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 AMPD3Q01432 767 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 KCNA10Q16322 511 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 CNNM4Q6P4Q7 775 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 GRAMD1CQ8IYS0 662 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 ARRDC4Q8NCT1 418 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 DEFB118Q96PH6 123 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 MTG1Q9BT17 334 aaPredicted RBP18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 LRRC27Q9C0I9 530 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 CYP26B1Q9NR63 512 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 KCND2Q9NZV8 630 aa18.48■□□□□ 0.55
CCDC90B-202ENST00000455220 ARHGEF35A5YM69 484 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 MOXD2PA6NHM9 499 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 ZBTB42B2RXF5 422 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 GTPBP6O43824 516 aaPredicted RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CYP11B2P19099 503 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 PSEN2P49810 448 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 MFSD10Q14728 455 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 POSTNQ15063 836 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 XKR9Q5GH70 373 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 RINT1Q6NUQ1 792 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CAVIN1Q6NZI2 390 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 C1orf186Q6ZWK4 172 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 TRMT1LQ7Z2T5 733 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 STAMQ92783 540 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CEP170P1Q96L14 293 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 C7orf25Q9BPX7 421 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 TRIM9Q9C026 710 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 MCOLN1Q9GZU1 580 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CRISPLD2Q9H0B8 497 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 HOOK1Q9UJC3 728 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 COL1A2P08123 1366 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 MYMKA6NI61 221 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 MYCP01106 439 aaPredicted RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 SSBP05455 408 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 GJB1P08034 283 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 AFMP43652 599 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 DHX8Q14562 1220 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 KIAA0753Q2KHM9 967 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 ARSHQ5FYA8 562 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 PADI6Q6TGC4 694 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CXCL17Q6UXB2 119 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 RBM43Q6ZSC3 357 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 GPBP1Q86WP2 473 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CCDC43Q96MW1 224 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 SH2D3AQ9BRG2 576 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 RUSC1Q9BVN2 902 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 TRPC6Q9Y210 931 aa18.47■□□□□ 0.55
CCDC90B-202ENST00000455220 CABYRO75952 493 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 PRR29P0C7W0 189 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 ACLYP53396 1101 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 DPYDQ12882 1025 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 CAMK4Q16566 473 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 MTERF2Q49AM1 385 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 ZNF484Q5JVG2 852 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 PDLIM7Q9NR12 457 aa18.46■□□□□ 0.55
CCDC90B-202ENST00000455220 DNM1LO00429 736 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 DGAT1O75907 488 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 SGPL1O95470 568 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 INSRRP14616 1297 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 GUCY2CP25092 1073 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 PNOCQ13519 176 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 CUL4BQ13620 913 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 SPATA20Q8TB22 786 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 DDX12PQ92771 950 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 DNAJC19Q96DA6 116 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 DHX33Q9H6R0 707 aaKnown RBP18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 PHF24Q9UPV7 400 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 KAT6AQ92794 2004 aa18.45■□□□□ 0.54
CCDC90B-202ENST00000455220 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 CASP1P29466 404 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 HOXC8P31273 242 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 RFC5P40937 340 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 U2AF1L4Q8WU68 220 aaKnown RBP18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 TIPINQ9BVW5 301 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 BLZF1Q9H2G9 400 aa18.44■□□□□ 0.54
CCDC90B-202ENST00000455220 KBTBD13C9JR72 458 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 SMIM10L2AP0DMW4 78 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 SMIM10L2BP0DMW5 78 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 NT5DC1Q5TFE4 455 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 XPNPEP1Q9NQW7 623 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 KIAA1468Q9P260 1216 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 NRCAMQ92823 1304 aa18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-202ENST00000455220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 IGKV6-21A0A0C4DH24 114 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 FRMD3A2A2Y4 597 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 RRN3P2A6NIE6 340 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 KLRC4O43908 158 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 MAFO75444 373 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms