RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
CLK3-203ENST00000454830 FRMD4BQ9Y2L6 1034 aa15□□□□□ -0.01
CLK3-203ENST00000454830 FER1L6Q2WGJ9 1857 aa15□□□□□ -0.01
CLK3-203ENST00000454830 KIF11P52732 1056 aa15□□□□□ -0.01
CLK3-203ENST00000454830 VGLL4Q14135 290 aa15□□□□□ -0.01
CLK3-203ENST00000454830 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
CLK3-203ENST00000454830 GBP3Q9H0R5 595 aa15□□□□□ -0.01
CLK3-203ENST00000454830 ACAD9Q9H845 621 aa15□□□□□ -0.01
CLK3-203ENST00000454830 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
CLK3-203ENST00000454830 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
CLK3-203ENST00000454830 FAM184BQ9ULE4 1060 aa15□□□□□ -0.01
CLK3-203ENST00000454830 UBIAD1Q9Y5Z9 338 aa15□□□□□ -0.01
CLK3-203ENST00000454830 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
CLK3-203ENST00000454830 FDX1P10109 184 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
CLK3-203ENST00000454830 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
CLK3-203ENST00000454830 KCNMA1Q12791 1236 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 EXOC3L4Q17RC7 722 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 CAPZA3Q96KX2 299 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.018e-7■■■■■ 96.2
CLK3-203ENST00000454830 PNMA2Q9UL42 364 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 REXO2Q9Y3B8 237 aaKnown RBP14.99□□□□□ -0.01
CLK3-203ENST00000454830 SLC9A1P19634 815 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 MAGEA1P43355 309 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 HERVK_113P62684 666 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 SLC9C1Q4G0N8 1177 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 MOB2Q70IA6 237 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 EEPD1Q7L9B9 569 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 CAGE1Q8TC20 777 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 DUSP10Q9Y6W6 482 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 WDR64B1ANS9 1081 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 PEX3P56589 373 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 MAP3K9P80192 1104 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 ZNF408Q9H9D4 720 aa14.99□□□□□ -0.01
CLK3-203ENST00000454830 HOXD13P35453 343 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 NEK9Q8TD19 979 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 IQCDQ96DY2 449 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 LACRTQ9GZZ8 138 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 ARHGAP20Q9P2F6 1191 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 GABBR1Q9UBS5 961 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 PLAGL2Q9UPG8 496 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 ASTN1O14525 1302 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 FRMPD4Q14CM0 1322 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 NF2P35240 595 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 GFPT1Q06210 699 aaPredicted RBP14.98□□□□□ -0.01
CLK3-203ENST00000454830 KLHL30Q0D2K2 578 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 UGCGQ16739 394 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 PDXDC1Q6P996 788 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 CCDC170Q8IYT3 715 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 OLFML3Q9NRN5 406 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 TRAF3IP3Q9Y228 551 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 A0A1W2PQJ5 194 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 BCRP11274 1271 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 PSMC2P35998 433 aaKnown RBP14.98□□□□□ -0.01
CLK3-203ENST00000454830 ARHGAP25P42331 645 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 CATSPERGQ6ZRH7 1159 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 METTL14Q9HCE5 456 aaKnown RBP14.98□□□□□ -0.01
CLK3-203ENST00000454830 A1CFQ9NQ94 594 aaKnown RBP14.98□□□□□ -0.01
CLK3-203ENST00000454830 ZNF112Q9UJU3 913 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 MRFAP1Q9Y605 127 aa14.98□□□□□ -0.01
CLK3-203ENST00000454830 SLC16A4O15374 487 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 USP2O75604 605 aaPredicted RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 ASIC2Q16515 512 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 MEA1Q16626 185 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 FIGNQ5HY92 759 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 SWSAP1Q6NVH7 229 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 ZNF720Q7Z2F6 126 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 CEP170P1Q96L14 293 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 ADARB2Q9NS39 739 aaKnown RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 GCNT4Q9P109 453 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 CEP72Q9P209 647 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 HDAC6Q9UBN7 1215 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 DHX15O43143 795 aaKnown RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 FECHP22830 423 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 PSMC5P62195 406 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 KRT76Q01546 638 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 FRMD5Q7Z6J6 570 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 ANKRD7Q92527 254 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 PSMB7Q99436 277 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 ZNF214Q9UL59 606 aaPredicted RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 RPTORQ8N122 1335 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 RARRES1P49788 294 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 GNPTABQ3T906 1256 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 GBP6Q6ZN66 633 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 SECISBP2LQ93073 1101 aaKnown RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 ARGLU1Q9NWB6 273 aaPredicted RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 SEL1LQ9UBV2 794 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
CLK3-203ENST00000454830 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 PCDHA13Q9Y5I0 950 aa14.97□□□□□ -0.01
CLK3-203ENST00000454830 SPDYE16A6NNV3 312 aaPredicted RBP14.96□□□□□ -0.01
CLK3-203ENST00000454830 EIF3CLB5ME19 914 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms