RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 CETN3O15182 167 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 EDIL3O43854 480 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 GFPT2O94808 682 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 MYCP01106 439 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 CAPN2P17655 700 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 SHMT1P34896 483 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 KLK7P49862 253 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 NFIL3Q16649 462 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 Q4G0T1 1027 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 DYMQ7RTS9 669 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 HAS1Q92839 578 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 FAM20AQ96MK3 541 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 SELENOOQ9BVL4 669 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 ARHGAP39Q9C0H5 1083 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 FAM207AQ9NSI2 230 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 TRAF3IP3Q9Y228 551 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 SNCAIPQ9Y6H5 919 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 UBE4BO95155 1302 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 SLC16A3O15427 465 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CALUO43852 315 aaPredicted RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 RNF40O75150 1001 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PRPF6O94906 941 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PLA2G4BP0C869 781 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 EPB41P11171 864 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 RPL13P26373 211 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 BMT2Q1RMZ1 405 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 HGSNATQ68CP4 663 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 IFT20Q8IY31 132 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 LRRC47Q8N1G4 583 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ZDHHC15Q96MV8 337 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ANO3Q9BYT9 981 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TANGO6Q9C0B7 1094 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CPVLQ9H3G5 476 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ZCCHC17Q9NP64 241 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 STIM2Q9P246 746 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 HDAC6Q9UBN7 1215 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PCDHGC5Q9Y5F6 944 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GTPBP10A4D1E9 387 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GOLGA6BA6NDN3 693 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 PDXKO00764 312 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 IRF6O14896 467 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CETPP11597 493 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GAP43P17677 238 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 RPA1P27694 616 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CIITAP33076 1130 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CYP27A1Q02318 531 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 KCNMA1Q12791 1236 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ARHGEF6Q15052 776 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 NAB2Q15742 525 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TDRD12Q587J7 1177 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 ERO1BQ86YB8 467 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GMCL1P1Q8NEA9 526 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CAPZA3Q96KX2 299 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 KCTD10Q9H3F6 313 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 CAPN6Q9Y6Q1 641 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TRIOBPQ9H2D6 2365 aa11.6□□□□□ -0.55
GTF3C2-206ENST00000454704 TLR2O60603 784 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 SHOX2O60902 331 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 MOCS3O95396 460 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 SYF2O95926 243 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 CYP11B2P19099 503 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 PRKCIP41743 596 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 SNAPC2Q13487 334 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 PICALMQ13492 652 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 ASIC2Q16515 512 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 TMEM179Q6ZVK1 233 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 KCNK18Q7Z418 384 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 VPS36Q86VN1 386 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 GPBP1Q86WP2 473 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 MREGQ8N565 214 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 FAM76AQ8TAV0 307 aa11.59□□□□□ -0.55
GTF3C2-206ENST00000454704 SH3TC2Q8TF17 1288 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms