RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ERVK-5Q9HDB9 667 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 JADE2Q9NQC1 790 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RNF19AQ9NV58 838 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 WDR81Q562E7 1941 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SPTBN2O15020 2390 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MYH9P35579 1960 aaKnown RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NCOR2Q9Y618 2525 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DMXL1Q9Y485 3027 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DENND3A2RUS2 1198 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMEM150BA6NC51 233 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 HIDE1A8MVS5 230 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LOC730098B7Z3J9 87 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM86B1E9PN63 330 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CSDE1O75534 798 aaKnown RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FGF18O76093 207 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EYA4O95677 639 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RB1P06400 928 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM86B2P0C5J1 330 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CPA1P15085 419 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FGFR4P22455 802 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CA8P35219 290 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ZXDAP98168 799 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TRAF1Q13077 416 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LONRF3Q496Y0 759 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 JAKMIP3Q5VZ66 844 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CREB3L3Q68CJ9 461 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KANK3Q6NY19 840 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 APOA5Q6Q788 366 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MTHFD1LQ6UB35 978 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LRRC71Q8N4P6 559 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 METTL13Q8N6R0 699 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 COLGALT1Q8NBJ5 622 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GIMAP8Q8ND71 665 aaPredicted RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RASGRP4Q8TDF6 673 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RUFY2Q8WXA3 655 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 AUTS2Q8WXX7 1259 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EDAQ92838 391 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GJA10Q969M2 543 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PBXIP1Q96AQ6 731 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CDHR1Q96JP9 859 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TCF25Q9BQ70 676 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SDF4Q9BRK5 362 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PLVAPQ9BX97 442 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CELF4Q9BZC1 486 aaKnown RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TLE6Q9H808 572 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ANO2Q9NQ90 1003 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ENTPD7Q9NQZ7 604 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TLR9Q9NR96 1032 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 BRPF3Q9ULD4 1205 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NAP1L2Q9ULW6 460 aaPredicted RBP6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SLC12A7Q9Y666 1083 aa6.84□□□□□ -1.31
HLA-DPA3-207ENST00000454398 DNAH14Q0VDD8 3507 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CACNA1AO00555 2505 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CHMP2AO43633 222 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RPS6KA5O75582 802 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C22orf31O95567 290 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ASGR2P07307 311 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATP4AP20648 1035 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KLRC1P26715 233 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MCM5P33992 734 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TECP42680 631 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 STAT5BP51692 787 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ADCY7P51828 1080 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FUT2Q10981 343 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 COASYQ13057 564 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KCNC3Q14003 757 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CBX2Q14781 532 aaPredicted RBP6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 UGCGQ16739 394 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DUSP6Q16828 381 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CEP55Q53EZ4 464 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 IER5Q5VY09 327 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZBTB33Q86T24 672 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMEM173Q86WV6 379 aaPredicted RBP6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CKAP2LQ8IYA6 745 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KIAA0319LQ8IZA0 1049 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATP8B4Q8TF62 1192 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MAP4K1Q92918 833 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 P2RX5Q93086 422 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PPP2R3CQ969Q6 453 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ASIC4Q96FT7 647 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MXRA8Q9BRK3 442 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 UPF3BQ9BZI7 483 aaKnown RBP6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TYW1Q9NV66 732 aaKnown RBP6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ST3GAL5Q9UNP4 418 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PCDHB7Q9Y5E2 793 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PCDHA2Q9Y5H9 948 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CEP250Q9BV73 2442 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DENND4AQ7Z401 1863 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MYO10Q9HD67 2058 aa6.83□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 COL4A3Q01955 1670 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SMIM35A0A1B0GVV1 85 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms