RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RFC2P35250 354 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 CATSPER3Q86XQ3 398 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 ERMNQ8TAM6 284 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 VWCEQ96DN2 955 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 FTOQ9C0B1 505 aaKnown RBP eCLIP31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 TUFT1Q9NNX1 390 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 MED24O75448 989 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 PARNO95453 639 aaKnown RBP31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 F13A1P00488 732 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 RPLP2P05387 115 aaKnown RBP31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 RPA1P27694 616 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 YWHABP31946 246 aaKnown RBP31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 GPNMBQ14956 572 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 PTPAQ15257 358 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 FAM26DQ5JW98 314 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 FOXD4L5Q5VV16 416 aaPredicted RBP31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 C16orf59Q7L2K0 433 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 FOXD4L4Q8WXT5 416 aaPredicted RBP31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 IL23AQ9NPF7 189 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 SIP14410 1827 aa31.33■■■□□ 2.61
SMARCC1-203ENST00000454240 RANBP2P49792 3224 aaKnown RBP31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 RSPH10B2B2RC85 870 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 RSPH10BP0C881 870 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 MTERF2Q49AM1 385 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 RSPH3Q86UC2 560 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 TET1Q8NFU7 2136 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 STK24Q9Y6E0 443 aa31.32■■■□□ 2.6
SMARCC1-203ENST00000454240 ZBTB39O15060 712 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 PLA2G4FQ68DD2 849 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 OTUD6AQ7L8S5 288 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 RPUSD2Q8IZ73 545 aaKnown RBP31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 KIAA0319LQ8IZA0 1049 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 NME8Q8N427 588 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 LINC01465Q8N7H1 131 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 USP28Q96RU2 1077 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 SH2D3AQ9BRG2 576 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 FAM49AQ9H0Q0 323 aaPredicted RBP31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 CYP26B1Q9NR63 512 aa31.31■■■□□ 2.6
SMARCC1-203ENST00000454240 LOXHD1Q8IVV2 1947 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 VWA3AA6NCI4 1184 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 MUTP22033 750 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 NPEPPSP55786 919 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 TBC1D8BQ0IIM8 1120 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 MBTPS1Q14703 1052 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 HAUS3Q68CZ6 603 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 PPME1Q9Y570 386 aa31.3■■■□□ 2.6
SMARCC1-203ENST00000454240 BRD1O95696 1058 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 CHRNA1P02708 482 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 CTSHP09668 335 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 ACRP10323 421 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 XRCC6P12956 609 aaKnown RBP eCLIP31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 MGAT3Q09327 533 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 EFCAB12Q6NXP0 572 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 ZNF579Q8NAF0 562 aaKnown RBP31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 CEP170P1Q96L14 293 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 ANKEF1Q9NU02 776 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 ZDHHC9Q9Y397 364 aa31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 MORC2Q9Y6X9 1032 aaPredicted RBP31.29■■■□□ 2.6
SMARCC1-203ENST00000454240 IGKV6-21A0A0C4DH24 114 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 NBNO60934 754 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 CXCL10P02778 98 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 PFKMP08237 780 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 TMEM240Q5SV17 173 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 DEFB128Q7Z7B8 93 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 METTL13Q8N6R0 699 aa31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.28■■■□□ 2.63e-9■■■□□ 14.8
SMARCC1-203ENST00000454240 MMTAG2Q9BU76 263 aaKnown RBP31.28■■■□□ 2.6
SMARCC1-203ENST00000454240 A0A1W2PPC1 479 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 PP2D1A8MPX8 630 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 MAFO75444 373 aaPredicted RBP31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 CDC25AP30304 524 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 CCT6AP40227 531 aaKnown RBP31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 MRPS6P82932 125 aaKnown RBP31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 CEBPZQ03701 1054 aaKnown RBP31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 SHHQ15465 462 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 ECM1Q16610 540 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 SNX29Q8TEQ0 813 aa31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 ZNF396Q96N95 335 aaPredicted RBP31.27■■■□□ 2.6
SMARCC1-203ENST00000454240 NASPP49321 788 aaPredicted RBP31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 SLC39A14Q15043 492 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 XKR9Q5GH70 373 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 C9orf50Q5SZB4 431 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 IER5Q5VY09 327 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 KRT79Q5XKE5 535 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 PSRC1Q6PGN9 363 aaPredicted RBP31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 POTEGQ6S5H5 508 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 ZNF365Q70YC5 407 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 TDHQ8IZJ6 230 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 LRRC71Q8N4P6 559 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 PIGOQ8TEQ8 1089 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 AK8Q96MA6 479 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 NACC1Q96RE7 527 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 DHX33Q9H6R0 707 aaKnown RBP31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 CDY2AQ9Y6F7 541 aa31.26■■■□□ 2.59
SMARCC1-203ENST00000454240 A0A087WWV3 80 aa31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 TMOD1P28289 359 aa31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 CLCN3P51790 818 aa31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 GRIN1Q05586 938 aa31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 OSBPL7Q9BZF2 842 aa31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 SUGCTQ9HAC7 445 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms