RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	NUB1	Q9Y5A7	615 aa		5.1	□□□□□ -1.59
DDX59-208	ENST00000453944	GPR45	Q9Y5Y3	372 aa		5.1	□□□□□ -1.59
DDX59-208	ENST00000453944	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	NFIB	O00712	420 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	COBL	O75128	1261 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	PRPF6	O94906	941 aa	Known RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	HPX	P02790	462 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	PRNP	P04156	253 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	FAH	P16930	419 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	FUT4	P22083	530 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MC4R	P32245	332 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MTNR1B	P49286	362 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	CCT2	P78371	535 aa	Known RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	ADCY1	Q08828	1119 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	GALE	Q14376	348 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	IL31	Q6EBC2	164 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	INTS5	Q6P9B9	1019 aa	Known RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	SLC23A3	Q6PIS1	610 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	ESPNL	Q6ZVH7	1005 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	CATIP	Q7Z7H3	387 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	DCP2	Q8IU60	420 aa	Known RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	LYSMD2	Q8IV50	215 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	NETO2	Q8NC67	525 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	SLC35G2	Q8TBE7	412 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MORC4	Q8TE76	937 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MYLIP	Q8WY64	445 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MYH16	Q9H6N6	1097 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	PAK6	Q9NQU5	681 aa	Predicted RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	MBNL3	Q9NUK0	354 aa	Known RBP	5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	BTBD7	Q9P203	1132 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	SERPINB13	Q9UIV8	391 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	RCAN3	Q9UKA8	241 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	TMPRSS11E	Q9UL52	423 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	FAM50B	Q9Y247	325 aa		5.09	□□□□□ -1.59
DDX59-208	ENST00000453944	UBA6	A0AVT1	1052 aa	Predicted RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	NUDT19	A8MXV4	375 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	APAF1	O14727	1248 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	CTNND1	O60716	968 aa	Known RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	ADAMTS4	O75173	837 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	NDUFS2	O75306	463 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	LRG1	P02750	347 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PNLIP	P16233	465 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	GDNF	P39905	211 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	RGS3	P49796	1198 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	NEK3	P51956	506 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	LGALS4	P56470	323 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PRR5	P85299	388 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	CDK17	Q00537	523 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	SLC6A3	Q01959	620 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	KIF23	Q02241	960 aa	Predicted RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	TRIM25	Q14258	630 aa	Known RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	MYBPC3	Q14896	1274 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	NR0B2	Q15466	257 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	COBLL1	Q53SF7	1204 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PHYKPL	Q8IUZ5	450 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	C7orf31	Q8N865	590 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	RUNDC1	Q96C34	613 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PEX11G	Q96HA9	241 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	AIFM3	Q96NN9	605 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	NUP88	Q99567	741 aa	Predicted RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	GTPBP4	Q9BZE4	634 aa	Known RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	SLC39A2	Q9NP94	309 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PRDM11	Q9NQV5	511 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	DPP7	Q9UHL4	492 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	DBR1	Q9UK59	544 aa	Known RBP	5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	PLA2G2D	Q9UNK4	145 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944	DNM3	Q9UQ16	869 aa		5.08	□□□□□ -1.6
DDX59-208	ENST00000453944		A6NNZ2	444 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	CYBB	P04839	570 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	RNASE1	P07998	156 aa	Known RBP	5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	POU2F2	P09086	479 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	TRIM27	P14373	513 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	HSPA6	P17066	643 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	ITGB7	P26010	798 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	ARL4A	P40617	200 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	STAT5A	P42229	794 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	HERVK_113	P62684	666 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	DBP	Q10586	325 aa	Predicted RBP	5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	HDAC1	Q13547	482 aa	Predicted RBP	5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	GBX1	Q14549	363 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	PLCL1	Q15111	1095 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	LLGL1	Q15334	1064 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	TTC38	Q5R3I4	469 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	GORAB	Q5T7V8	394 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	PRAMEF9	Q5VWM5	478 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	TIGD7	Q6NT04	549 aa	Predicted RBP	5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	PAQR3	Q6TCH7	311 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	LRSAM1	Q6UWE0	723 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	NME9	Q86XW9	330 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	DTX1	Q86Y01	620 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	MIER2	Q8N344	545 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	SVIP	Q8NHG7	77 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	MAML3	Q96JK9	1138 aa		5.07	□□□□□ -1.6
DDX59-208	ENST00000453944	TAAR9	Q96RI9	348 aa		5.07	□□□□□ -1.6

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