RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 BACH1O14867 736 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ZWINTO95229 277 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 PRCPP42785 496 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 MTIF2P46199 727 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 YARSP54577 528 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ADARP55265 1226 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NTRK3Q16288 839 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TNFAIP8L3Q5GJ75 292 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SNX30Q5VWJ9 437 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 APOA5Q6Q788 366 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 DNAJC14Q6Y2X3 702 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ARHGEF18Q6ZSZ5 1173 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TMEM110Q86TL2 294 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SLF2Q8IX21 1173 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ARHGAP24Q8N264 748 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 KIF2BQ8N4N8 673 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SAMD3Q8N6K7 520 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 CKAP2Q8WWK9 683 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SCG3Q8WXD2 468 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 POLR3CQ9BUI4 534 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NOC4LQ9BVI4 516 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ASCC2Q9H1I8 757 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TAOK3Q9H2K8 898 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 MAGEF1Q9HAY2 307 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NMRK1Q9NWW6 199 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 EHD2Q9NZN4 543 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 RASAL2Q9UJF2 1139 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 ANGPTL2Q9UKU9 493 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 USH1CQ9Y6N9 552 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 SETD1BQ9UPS6 1966 aaKnown RBP9.06□□□□□ -0.96
SMCO1-202ENST00000452776 A2ML1A8K2U0 1454 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 NID2Q14112 1375 aa9.06□□□□□ -0.96
SMCO1-202ENST00000452776 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ZSCAN5CA6NGD5 496 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 A8MXQ7 604 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 NCK2O43639 380 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PALMO75781 387 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SERPING1P05155 500 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ANXA13P27216 316 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PTPN4P29074 926 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MLH1P40692 756 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 USP11P51784 963 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 OXCT1P55809 520 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 RASSF7Q02833 373 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PDCD4Q53EL6 469 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 FOXB2Q5VYV0 432 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PPP1R21Q6ZMI0 780 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MARK2Q7KZI7 788 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ZC3H18Q86VM9 953 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MAP7D3Q8IWC1 876 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SYCE1Q8N0S2 351 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SDR16C5Q8N3Y7 309 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PROCA1Q8NCQ7 364 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 IL17REQ8NFR9 667 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 DIS3LQ8TF46 1054 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CTNNBL1Q8WYA6 563 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 LPIN2Q92539 896 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 EDC3Q96F86 508 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PSMB7Q99436 277 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ZNF184Q99676 751 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SLC26A6Q9BXS9 759 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 DDX21Q9NR30 783 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 STX18Q9P2W9 335 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MTRF1LQ9UGC7 380 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 LNPEPQ9UIQ6 1025 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 TBC1D30Q9Y2I9 924 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 R3HDM2Q9Y2K5 976 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PCDHB6Q9Y5E3 794 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 FLT4P35916 1363 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MAST3O60307 1309 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 TCP11X1B4DZS4 312 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 KRIT1O00522 736 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 FGAP02671 866 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 LYNP07948 512 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PIM1P11309 404 aaPredicted RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PAX3P23760 479 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 CCNE1P24864 410 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 TRAPPC10P48553 1259 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 NEK2P51955 445 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 ANTXR2P58335 489 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 HPCAP84074 193 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
SMCO1-202ENST00000452776 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
SMCO1-202ENST00000452776 MTFR1Q15390 333 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms