RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KRT9P35527 623 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 BAATQ14032 418 aaPredicted RBP11.86□□□□□ -0.51
PKP4-206ENST00000452162 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 FGD4Q96M96 766 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 DNAJC7Q99615 494 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 MSH4O15457 936 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
PKP4-206ENST00000452162 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 SLC30A10Q6XR72 485 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 EEF2KMTQ96G04 330 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 WDR24Q96S15 920 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 SLC5A4Q9NY91 659 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 PFASO15067 1338 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 NKRFO15226 690 aaKnown RBP eCLIP11.85□□□□□ -0.517e-8■□□□□ 10.2
PKP4-206ENST00000452162 IGHA2P01877 340 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 CYP11B2P19099 503 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 CYP2C19P33261 490 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 SLC12A3P55017 1021 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 RPS6P62753 249 aaKnown RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 ZCWPW2Q504Y3 356 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 LRRC55Q6ZSA7 311 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 FAM133AQ8N9E0 248 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 ERGIC2Q96RQ1 377 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 PCDHA2Q9Y5H9 948 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 FRMD3A2A2Y4 597 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 PES1O00541 588 aaKnown RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
PKP4-206ENST00000452162 SPATA31C1P0DKV0 1188 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 RPA1P27694 616 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 GNG11P61952 73 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 LRRC41Q15345 812 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 OR8K1Q8NGG5 319 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 ERMNQ8TAM6 284 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 NOC4LQ9BVI4 516 aaKnown RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 DIS3Q9Y2L1 958 aaKnown RBP11.85□□□□□ -0.51
PKP4-206ENST00000452162 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 ASTN1O14525 1302 aa11.85□□□□□ -0.51
PKP4-206ENST00000452162 A0A0U1RQJ8 604 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 CCDC85CA6NKD9 419 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
PKP4-206ENST00000452162 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
PKP4-206ENST00000452162 UBXN2AP68543 259 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 CACNB2Q08289 660 aaPredicted RBP11.84□□□□□ -0.51
PKP4-206ENST00000452162 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 OLFML2BQ68BL8 750 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 NCAPH2Q6IBW4 605 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 FGFBP2Q9BYJ0 223 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 LUC7L2Q9Y383 392 aaKnown RBP11.84□□□□□ -0.51
PKP4-206ENST00000452162 NPHP3-ACAD11A0A0J9YXS1 232 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 GCOM1H8Y6P7 765 aaPredicted RBP11.84□□□□□ -0.51
PKP4-206ENST00000452162 POLR2MP0CAP2 368 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 KLK7P49862 253 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 MEA1Q16626 185 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 VWA3BQ502W6 1294 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 PRAMEF19Q5SWL8 479 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 ACRBPQ8NEB7 543 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 TSG101Q99816 390 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 TINF2Q9BSI4 451 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 COL20A1Q9P218 1284 aa11.84□□□□□ -0.51
PKP4-206ENST00000452162 CFBP00751 764 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 CCL5P13501 91 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 CASQ1P31415 396 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 FIGNQ5HY92 759 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 WDR59Q6PJI9 974 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 CHP1Q99653 195 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 A0A1W2PQJ5 194 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 URI1O94763 535 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms