RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 EPHA7Q15375 998 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 RAB30Q15771 203 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 ZNF697Q5TEC3 545 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 RSPH3Q86UC2 560 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 CRIPAKQ8N1N5 446 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 SEPT8Q92599 483 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 CDX2Q99626 313 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 HSD17B14Q9BPX1 270 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 CELF4Q9BZC1 486 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 MAGEB2O15479 319 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 GPR32O75388 356 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 GHRP10912 638 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 XKR3Q5GH77 459 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 IER5Q5VY09 327 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 ANO5Q75V66 913 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 TMCO2Q7Z6W1 182 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 RTN4RL1Q86UN2 441 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 CKAP2LQ8IYA6 745 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 FAM161BQ96MY7 647 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 NKX2-4Q9H2Z4 354 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 TCEAL9Q9UHQ7 104 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 STXBP5LQ9Y2K9 1186 aa18.13■□□□□ 0.49
SCAMP4-205ENST00000452128 TMEM150BA6NC51 233 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 SLITRK3O94933 977 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 GJB5O95377 273 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 P4HBP07237 508 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 PSMC5P62195 406 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 SAFBQ15424 915 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 FAM184AQ8NB25 1140 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 APBB2Q92870 758 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 IFIH1Q9BYX4 1025 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 MSRAQ9UJ68 235 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 CEP131Q9UPN4 1083 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
SCAMP4-205ENST00000452128 WDR81Q562E7 1941 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 ENPP3O14638 875 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 QARSP47897 775 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 HTRA4P83105 476 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 TMEM62Q0P6H9 643 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 ORC2Q13416 577 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 CALCRLQ16602 461 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 USP38Q8NB14 1042 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 BANK1Q8NDB2 785 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 LINC01599Q8WXQ3 324 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 TOP1MTQ969P6 601 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 RGL1Q9NZL6 768 aa18.11■□□□□ 0.49
SCAMP4-205ENST00000452128 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 ZBTB39O15060 712 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 NEMFO60524 1076 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 LYPLA2O95372 231 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 TAP1Q03518 808 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 DRP2Q13474 957 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 EFCAB12Q6NXP0 572 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 TRMT1LQ7Z2T5 733 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 TMX1Q9H3N1 280 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 PCDHA12Q9UN75 941 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
SCAMP4-205ENST00000452128 SIP14410 1827 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 MYO9BQ13459 2157 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 LCHNA4D1U4 455 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 GJB2P29033 226 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 CD52P31358 61 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 MCM7P33993 719 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 KCNJ6P48051 423 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 CLCN3P51790 818 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 ZNF174Q15697 407 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 FAM43BQ6ZT52 329 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 SP7Q8TDD2 431 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 RAD9AQ99638 391 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 ERVK-5Q9HDB9 667 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 PADI3Q9ULW8 664 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 NOC2LQ9Y3T9 749 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 TRANK1O15050 2925 aa18.09■□□□□ 0.49
SCAMP4-205ENST00000452128 PRUNE2Q8WUY3 3088 aa18.08■□□□□ 0.49
SCAMP4-205ENST00000452128 DDX11L8A8MPP1 907 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 MAFO75444 373 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 VTNP04004 478 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 CA3P07451 260 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 SPATA31C1P0DKV0 1188 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 TXKP42681 527 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 NPEPPSP55786 919 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 ADGRE1Q14246 886 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 SPRED2Q7Z698 418 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms