RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MUTP22033 750 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 UBA7P41226 1012 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 NPEPPSP55786 919 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 FAAP100Q0VG06 881 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 KARSQ15046 597 aaKnown RBP14.56□□□□□ -0.08
VPS33A-202ENST00000451053 TARBP2Q15633 366 aaKnown RBP14.56□□□□□ -0.08
VPS33A-202ENST00000451053 SKOR2Q2VWA4 1001 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-202ENST00000451053 MTERF2Q49AM1 385 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 ZNF484Q5JVG2 852 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 HYIQ5T013 277 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 SHC4Q6S5L8 630 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 TOX2Q96NM4 488 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 HTATIP2Q9BUP3 242 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 CCSER1Q9C0I3 900 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 LMBRD1Q9NUN5 540 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 KDM3AQ9Y4C1 1321 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 COL1A2P08123 1366 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 MBLAC1A4D2B0 266 aaPredicted RBP14.55□□□□□ -0.08
VPS33A-202ENST00000451053 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 E9PMD0 336 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 TLR3O15455 904 aaKnown RBP14.55□□□□□ -0.08
VPS33A-202ENST00000451053 C22orf31O95567 290 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 GNAT1P11488 350 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 CYP2C9P11712 490 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 XKR9Q5GH70 373 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 MTHFD1LQ6UB35 978 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 LRRC15Q8TF66 581 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 WNT8BQ93098 351 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 CEP170P1Q96L14 293 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 NACC1Q96RE7 527 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 CEP89Q96ST8 783 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 CYP26B1Q9NR63 512 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 ANKEF1Q9NU02 776 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 TUBE1Q9UJT0 475 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 ARID2Q68CP9 1835 aa14.55□□□□□ -0.08
VPS33A-202ENST00000451053 A0A087X0B3 334 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 SLC26A4O43511 780 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 PLCG1P19174 1290 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 KLRC1P26715 233 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 ADALQ6DHV7 355 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 SH3RF1Q7Z6J0 888 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 SERINC5Q86VE9 423 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 DHX38Q92620 1227 aaKnown RBP14.54□□□□□ -0.08
VPS33A-202ENST00000451053 CALML4Q96GE6 196 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 PDLIM7Q9NR12 457 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 NOD1Q9Y239 953 aa14.54□□□□□ -0.08
VPS33A-202ENST00000451053 TRIP12Q14669 1992 aaPredicted RBP14.54□□□□□ -0.08
VPS33A-202ENST00000451053 A0A1W2PQ27 194 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 A0A1W2PQ64 194 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 A0A1W2PQD8 194 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 CLTBP09497 229 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 XRCC6P12956 609 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS33A-202ENST00000451053 TXLNAP40222 546 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 RARRES1P49788 294 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 RGS19P49795 217 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 PTK7Q13308 1070 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 DPF3Q92784 378 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 PANK2Q9BZ23 570 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 BMP2KQ9NSY1 1161 aaPredicted RBP14.53□□□□□ -0.08
VPS33A-202ENST00000451053 BLOC1S4Q9NUP1 217 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 DBR1Q9UK59 544 aaKnown RBP14.53□□□□□ -0.08
VPS33A-202ENST00000451053 TBX21Q9UL17 535 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 DNM3Q9UQ16 869 aa14.53□□□□□ -0.08
VPS33A-202ENST00000451053 TRIM43BA6NCK2 446 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 EVI5O60447 810 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 EYA4O95677 639 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 CLCN3P51790 818 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 TRIM71Q2Q1W2 868 aaKnown RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 LRRC71Q8N4P6 559 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 LINC01465Q8N7H1 131 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 PDILTQ8N807 584 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 TRIM43Q96BQ3 446 aaPredicted RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 CCDC43Q96MW1 224 aaKnown RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 NOC4LQ9BVI4 516 aaKnown RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 FAM49AQ9H0Q0 323 aaPredicted RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 PRDM5Q9NQX1 630 aaPredicted RBP14.52□□□□□ -0.09
VPS33A-202ENST00000451053 TMEM39AQ9NV64 488 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 CCDC39Q9UFE4 941 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 PPME1Q9Y570 386 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 KAT6AQ92794 2004 aa14.52□□□□□ -0.09
VPS33A-202ENST00000451053 UMODL1Q5DID0 1318 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 IGKV6-21A0A0C4DH24 114 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 SMIM35A0A1B0GVV1 85 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 ARHGEF35A5YM69 484 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 MAGEB2O15479 319 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 USO1O60763 962 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms