RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 CDHR1Q96JP9 859 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 AGO4Q9HCK5 861 aaKnown RBP11.6□□□□□ -0.55
LINC01004-202ENST00000450686 NAP1L2Q9ULW6 460 aaPredicted RBP11.6□□□□□ -0.55
LINC01004-202ENST00000450686 PLAGL2Q9UPG8 496 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 SNPHO15079 494 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 MMP1P03956 469 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CALM1P0DP23 149 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CALM2P0DP24 149 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CALM3P0DP25 149 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CDC27P30260 824 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 NRIP1P48552 1158 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ADCY7P51828 1080 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 FOXK1P85037 733 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 FUT2Q10981 343 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 RTN1Q16799 776 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ADCK5Q3MIX3 580 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 MTHFD1LQ6UB35 978 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ALYREFQ86V81 257 aaKnown RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CCDC60Q8IWA6 550 aaPredicted RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 SPPL3Q8TCT6 385 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 TMEM40Q8WWA1 233 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 CELF4Q9BZC1 486 aaKnown RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 RIC8AQ9NPQ8 531 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 BARX2Q9UMQ3 279 aaPredicted RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
LINC01004-202ENST00000450686 IGSF9BQ9UPX0 1349 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 ZDBF2Q9HCK1 2354 aa11.59□□□□□ -0.55
LINC01004-202ENST00000450686 WDR81Q562E7 1941 aa11.58□□□□□ -0.55
LINC01004-202ENST00000450686 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
LINC01004-202ENST00000450686 RRN3P2A6NIE6 340 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 GOLGA8AA7E2F4 631 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 GOLGA8BA8MQT2 603 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 PRR33A8MZF0 331 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 FAM86B1E9PN63 330 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 BACH1O14867 736 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 PER2O15055 1255 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 RB1P06400 928 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 FAM86B2P0C5J1 330 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 SCG2P13521 617 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 NDUFV1P49821 464 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 STAT5BP51692 787 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 KRT76Q01546 638 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 PUS10Q3MIT2 529 aaKnown RBP11.58□□□□□ -0.56
LINC01004-202ENST00000450686 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 FAM102BQ5T8I3 360 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 IER5Q5VY09 327 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 HFE2Q6ZVN8 426 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 SGMS1Q86VZ5 419 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 POF1BQ8WVV4 589 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.56
LINC01004-202ENST00000450686 CLEC1BQ9P126 229 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 NOC2LQ9Y3T9 749 aaKnown RBP11.58□□□□□ -0.56
LINC01004-202ENST00000450686 PCDHA2Q9Y5H9 948 aa11.58□□□□□ -0.56
LINC01004-202ENST00000450686 USP34Q70CQ2 3546 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 KLF18A0A0U1RQI7 1052 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 SMCO2A6NFE2 343 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ZBTB42B2RXF5 422 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 M0QZ92 97 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ZBTB43O43298 467 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 GLP2RO95838 553 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 VTNP04004 478 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 FGFR1P11362 822 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ALADP13716 330 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ATP4AP20648 1035 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 KLRC1P26715 233 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ZNF76P36508 570 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
LINC01004-202ENST00000450686 APOBRQ0VD83 1088 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ADAM15Q13444 863 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 DSG2Q14126 1118 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
LINC01004-202ENST00000450686 RNF135Q8IUD6 432 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 CMTR2Q8IYT2 770 aaKnown RBP11.57□□□□□ -0.56
LINC01004-202ENST00000450686 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 RASGRP4Q8TDF6 673 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 OSMRQ99650 979 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 APOL5Q9BWW9 433 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 ERVK-5Q9HDB9 667 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 CD207Q9UJ71 328 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 CDH22Q9UJ99 828 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 NFASCO94856 1347 aa11.57□□□□□ -0.56
LINC01004-202ENST00000450686 MEIS1O00470 390 aa11.56□□□□□ -0.56
LINC01004-202ENST00000450686 DHX15O43143 795 aaKnown RBP11.56□□□□□ -0.56
LINC01004-202ENST00000450686 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
LINC01004-202ENST00000450686 SREBF1P36956 1147 aa11.56□□□□□ -0.56
LINC01004-202ENST00000450686 PBX3P40426 434 aa11.56□□□□□ -0.56
LINC01004-202ENST00000450686 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms