RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 ZNF397Q8NF99 534 aaPredicted RBP9.29□□□□□ -0.92
HCG18-238ENST00000449544 MRPS27Q92552 414 aaKnown RBP9.29□□□□□ -0.92
HCG18-238ENST00000449544 STAMQ92783 540 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 ZNF558Q96NG5 402 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 CCDC172P0C7W6 258 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 EFNA5P52803 228 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 IRF5Q13568 498 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 SKOR2Q2VWA4 1001 aaPredicted RBP9.29□□□□□ -0.92
HCG18-238ENST00000449544 TDRD12Q587J7 1177 aaKnown RBP9.29□□□□□ -0.92
HCG18-238ENST00000449544 CFAP58Q5T655 872 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 KIFAP3Q92845 792 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 FTHL17Q9BXU8 183 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 MAGED2Q9UNF1 606 aaPredicted RBP9.29□□□□□ -0.92
HCG18-238ENST00000449544 TRPV2Q9Y5S1 764 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 ATP8B3O60423 1300 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 NHSQ6T4R5 1651 aa9.29□□□□□ -0.92
HCG18-238ENST00000449544 A0A087WWV3 80 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 LAD1O00515 517 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 VTNP04004 478 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PRPF38BQ5VTL8 546 aaKnown RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 MRPL4Q9BYD3 311 aaKnown RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 DBR1Q9UK59 544 aaKnown RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 MACROD2A1Z1Q3 448 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 CARNS1A5YM72 827 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 NRCAMQ92823 1304 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 TDP2O95551 362 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 OATP04181 439 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 ZSCAN22P10073 491 aaPredicted RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 YWHABP31946 246 aaKnown RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 RCAN1P53805 252 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 BFSP1Q12934 665 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PGM5Q15124 567 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 ME3Q16798 604 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 DEFB123Q8N688 67 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 GOLGA5Q8TBA6 731 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 GJA10Q969M2 543 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 RIT2Q99578 217 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PTPN18Q99952 460 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PARVGQ9HBI0 331 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PRKCBP05771 671 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 CACNB1Q02641 598 aaPredicted RBP9.28□□□□□ -0.92
HCG18-238ENST00000449544 REPS2Q8NFH8 660 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 CLDND1Q9NY35 253 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 RIPK3Q9Y572 518 aa9.28□□□□□ -0.92
HCG18-238ENST00000449544 PASKQ96RG2 1323 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 COBLO75128 1261 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 B3GAT3O94766 335 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 CCDC192P0DO97 292 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 PPM1AP35813 382 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 RFC5P40937 340 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 GOLGA8FQ08AF8 430 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 GOLGA8DPQ0D2H9 430 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 NPLOC4Q8TAT6 608 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 TIFAQ96CG3 184 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 ACAP3Q96P50 834 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 JADE2Q9NQC1 790 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SSX2IPQ9Y2D8 614 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 COL1A1P02452 1464 aaPredicted RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 TCRBV5S4A2TA0A5A2 114 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SMARCA1P28370 1054 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 ALDH1A3P47895 512 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SCRN1Q12765 414 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 ATP8B4Q8TF62 1192 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 IPO9Q96P70 1041 aaKnown RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 ACCSQ96QU6 501 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 RWDD3Q9Y3V2 267 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 MAP1BP46821 2468 aaKnown RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 BCRP11274 1271 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 MYL7Q01449 175 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 NECTIN1Q15223 517 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 PCNX4Q63HM2 1172 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 ZNF365Q70YC5 407 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.93
HCG18-238ENST00000449544 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 FERMT1Q9BQL6 677 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 CDY2AQ9Y6F7 541 aa9.27□□□□□ -0.93
HCG18-238ENST00000449544 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 H0YGN5 161 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 POLR2DO15514 142 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 SMIM10L2BP0DMW5 78 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 UBA1P22314 1058 aaKnown RBP9.26□□□□□ -0.93
HCG18-238ENST00000449544 GJA5P36382 358 aa9.26□□□□□ -0.93
HCG18-238ENST00000449544 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms