RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ODR4Q5SWX8 454 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 CFAP61Q8NHU2 1237 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 C9orf72Q96LT7 481 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 FAM237AA0A1B0GTK4 181 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 KIF1CO43896 1103 aaKnown RBP13.4□□□□□ -0.26
UBE3B-204ENST00000449510 UBOX5O94941 541 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 ATP5DP30049 168 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 GTF2IP78347 998 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 CTTNQ14247 550 aaKnown RBP13.4□□□□□ -0.26
UBE3B-204ENST00000449510 SEC23AQ15436 765 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 NAB2Q15742 525 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 ZC3H18Q86VM9 953 aaKnown RBP13.4□□□□□ -0.26
UBE3B-204ENST00000449510 CTAGE3PQ8IX95 158 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 SMC6Q96SB8 1091 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 BARHL2Q9NY43 387 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 A0A0G2JND7 137 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 CCDC188H7C350 402 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 GNPATO15228 680 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 MYL1P05976 194 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 UCHL3P15374 230 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 PARP10Q53GL7 1025 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 CEP95Q96GE4 821 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-204ENST00000449510 TACC3Q9Y6A5 838 aa13.4□□□□□ -0.26
UBE3B-204ENST00000449510 OPHN1O60890 802 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 YY1P25490 414 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 RFC4P35249 363 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 DRAP1Q14919 205 aaPredicted RBP13.4□□□□□ -0.27
UBE3B-204ENST00000449510 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 ZNF653Q96CK0 615 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 RILPQ96NA2 401 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.27
UBE3B-204ENST00000449510 TRIM4Q9C037 500 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 ISCUQ9H1K1 167 aa13.4□□□□□ -0.27
UBE3B-204ENST00000449510 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.4□□□□□ -0.27
UBE3B-204ENST00000449510 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ARHGEF35A5YM69 484 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 BCRP11274 1271 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ANKRD20A8PQ5CZ79 823 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 CCDC137Q6PK04 289 aaKnown RBP13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 RAD54LQ92698 747 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 SEMA4AQ9H3S1 761 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 IRAK4Q9NWZ3 460 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 GRID2IPA4D2P6 1211 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 LAD1O00515 517 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 KYNUQ16719 465 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 CFAP157Q5JU67 520 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 FYB2Q5VWT5 728 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 TTBK2Q6IQ55 1244 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ZNF804AQ7Z570 1209 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-204ENST00000449510 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 FAM84BQ96KN1 310 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-204ENST00000449510 TCHPQ9BT92 498 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 VCXQ9H320 206 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 FOXO6A8MYZ6 492 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 RASA4BC9J798 803 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 DNM1LO00429 736 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 RASA4O43374 803 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ATF2P15336 505 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 RASSF2P50749 326 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 SMAD1Q15797 465 aaKnown RBP13.39□□□□□ -0.27
UBE3B-204ENST00000449510 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 KBTBD4Q9NVX7 518 aa13.39□□□□□ -0.27
UBE3B-204ENST00000449510 ARAP3Q8WWN8 1544 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 TCRBV5S4A2TA0A5A2 114 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 ECEL1O95672 775 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-204ENST00000449510 CDK8P49336 464 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 EIF3BP55884 814 aaKnown RBP13.38□□□□□ -0.27
UBE3B-204ENST00000449510 C2CD6Q53TS8 623 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 SYCP2LQ5T4T6 812 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
UBE3B-204ENST00000449510 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 ANAPC5Q9UJX4 755 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
UBE3B-204ENST00000449510 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 SLC37A4O43826 429 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 GCLMP48507 274 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms