RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 COL4A6Q14031 1691 aa15.53■□□□□ 0.08
TOM1-211ENST00000449508 MUC3AQ02505 3323 aa15.53■□□□□ 0.08
TOM1-211ENST00000449508 DGKIO75912 1065 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 STAG3L1P0CL83 205 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 USP11P51784 963 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 NFX1Q12986 1120 aaKnown RBP15.52■□□□□ 0.08
TOM1-211ENST00000449508 STK3Q13188 491 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 TMEM266Q2M3C6 531 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 UPF3BQ9BZI7 483 aaKnown RBP15.52■□□□□ 0.08
TOM1-211ENST00000449508 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 CDHR5Q9HBB8 845 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 RC3H2Q9HBD1 1191 aaKnown RBP15.52■□□□□ 0.08
TOM1-211ENST00000449508 GABBR1Q9UBS5 961 aa15.52■□□□□ 0.08
TOM1-211ENST00000449508 ZBTB42B2RXF5 422 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 C5orf67F2Z3F1 127 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 MSH4O15457 936 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 RPS6KA5O75582 802 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 DEXIO95424 95 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 IBSPP21815 317 aaPredicted RBP15.51■□□□□ 0.07
TOM1-211ENST00000449508 KCNA5P22460 613 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
TOM1-211ENST00000449508 NPAS4Q8IUM7 802 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 METTL13Q8N6R0 699 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 CLP1Q92989 425 aaKnown RBP15.51■□□□□ 0.07
TOM1-211ENST00000449508 LENG9Q96B70 501 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 C11orf84Q9BUA3 381 aaPredicted RBP15.51■□□□□ 0.07
TOM1-211ENST00000449508 LRFN2Q9ULH4 789 aa15.51■□□□□ 0.07
TOM1-211ENST00000449508 NOC2LQ9Y3T9 749 aaKnown RBP15.51■□□□□ 0.07
TOM1-211ENST00000449508 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 EDIL3O43854 480 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 C22orf31O95567 290 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 LINC00271P0C7V0 271 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 TCEAL5Q5H9L2 206 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 ODR4Q5SWX8 454 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 CRIPAKQ8N1N5 446 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 TBCKQ8TEA7 893 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 PPP1R16BQ96T49 567 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 C22orf23Q9BZE7 217 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 LMAN2LQ9H0V9 348 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 TMX1Q9H3N1 280 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 NSUN3Q9H649 340 aaKnown RBP15.5■□□□□ 0.07
TOM1-211ENST00000449508 DISC1Q9NRI5 854 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 NRBP2Q9NSY0 501 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 CEP131Q9UPN4 1083 aa15.5■□□□□ 0.07
TOM1-211ENST00000449508 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 GPR182O15218 404 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 GRM6O15303 877 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 GAS7O60861 476 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 VTNP04004 478 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 KIZQ2M2Z5 673 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 LEXMQ3ZCV2 418 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 PAN2Q504Q3 1202 aaKnown RBP15.49■□□□□ 0.07
TOM1-211ENST00000449508 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
TOM1-211ENST00000449508 BLIDQ8IZY5 108 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.49■□□□□ 0.07
TOM1-211ENST00000449508 TMEM40Q8WWA1 233 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 FAM167AQ96KS9 214 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 RIT2Q99578 217 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 PLVAPQ9BX97 442 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 ERVK-5Q9HDB9 667 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 ALG13Q9NP73 1137 aaKnown RBP15.49■□□□□ 0.07
TOM1-211ENST00000449508 ST3GAL5Q9UNP4 418 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 PCDHB7Q9Y5E2 793 aa15.49■□□□□ 0.07
TOM1-211ENST00000449508 MAGEB2O15479 319 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 CHMP2AO43633 222 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 SFNP31947 248 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 SARSP49591 514 aaKnown RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 CRYBB1P53674 252 aaPredicted RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 EFCAB12Q6NXP0 572 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 SLC5A5Q92911 643 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 GJA10Q969M2 543 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 PABPC5Q96DU9 382 aaKnown RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 OSMRQ99650 979 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 ADAM2Q99965 735 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 TEKT3Q9BXF9 490 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
TOM1-211ENST00000449508 MRPL42Q9Y6G3 142 aaKnown RBP15.48■□□□□ 0.07
TOM1-211ENST00000449508 H3BQ06 376 aaPredicted RBP15.47■□□□□ 0.07
TOM1-211ENST00000449508 ZNF862O60290 1169 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 MGEA5O60502 916 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 GPR32O75388 356 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 CSPG5O95196 566 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 OATP04181 439 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 TMOD1P28289 359 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 GATMP50440 423 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 CLCN3P51790 818 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 JAK3P52333 1124 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 NLRP11P59045 1033 aaKnown RBP15.47■□□□□ 0.07
TOM1-211ENST00000449508 Q4G0T1 1027 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 GALNT17Q6IS24 598 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 PTCRAQ6ISU1 281 aaPredicted RBP15.47■□□□□ 0.07
TOM1-211ENST00000449508 SLC24A5Q71RS6 500 aa15.47■□□□□ 0.07
TOM1-211ENST00000449508 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms