RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 MAGEC3Q8TD91 643 aa22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 RNF25Q96BH1 459 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 LZTS2Q9BRK4 669 aa22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 BCAS3Q9H6U6 928 aa22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 ABCF3Q9NUQ8 709 aa22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 SNX24Q9Y343 169 aa22.27■■□□□ 1.16
SMARCD2-203ENST00000448276 POTEB3A0JP26 581 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 POTECB2RU33 542 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 PON1P27169 355 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 EIF6P56537 245 aaKnown RBP22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 DCAF12L1Q5VU92 463 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 POTEBQ6S5H4 581 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 TEX11Q8IYF3 940 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 RASGEF1CQ8N431 466 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 NSMCE1Q8WV22 266 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 CEP95Q96GE4 821 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 RAB34Q9BZG1 259 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 SWAP70Q9UH65 585 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 PPP1R9AQ9ULJ8 1098 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 LOC102724428A0A0B4J2F2 783 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 DDX3XO00571 662 aaKnown RBP eCLIP22.26■■□□□ 1.152e-9■■■□□ 16.9
SMARCD2-203ENST00000448276 VIMP08670 466 aaKnown RBP22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 ABCB4P21439 1286 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 SIK1P57059 783 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 POU5F1Q01860 360 aaKnown RBP22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 PDIA5Q14554 519 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 CCDC38Q502W7 563 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 ATXN2LQ8WWM7 1075 aaKnown RBP22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 SLITRK6Q9H5Y7 841 aa22.26■■□□□ 1.15
SMARCD2-203ENST00000448276 PPFIA2O75334 1257 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 GHRP10912 638 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 ADCY7P51828 1080 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 IFI16Q16666 785 aaKnown RBP22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 NBPF9Q3BBW0 867 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 ARMC9Q7Z3E5 817 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 CLEC10AQ8IUN9 316 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 MARCH10Q8NA82 808 aaPredicted RBP22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 CCDC113Q9H0I3 377 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 FAM114A2Q9NRY5 505 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 SCN7AQ01118 1682 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 GFPT2O94808 682 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 H2AFZP0C0S5 128 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 EXOC3L4Q17RC7 722 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 H2AFVQ71UI9 128 aa22.25■■□□□ 1.15
SMARCD2-203ENST00000448276 GNA14O95837 355 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 PLA2G4BP0C869 781 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 STAT3P40763 770 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 CDK8P49336 464 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 KCNQ4P56696 695 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 KCNJ2P63252 427 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 TXLNGYQ9BZA5 131 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 CNOT10Q9H9A5 744 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 BMP2KQ9NSY1 1161 aaPredicted RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 DDX25Q9UHL0 483 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 COL14A1Q05707 1796 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 IGSF9BQ9UPX0 1349 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 CETN3O15182 167 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 KRT18P05783 430 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 GALCP54803 685 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 SLC29A2Q14542 456 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 SEC14L1Q92503 715 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 PRCCQ92733 491 aaPredicted RBP22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 GPCPD1Q9NPB8 672 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 SLC12A4Q9UP95 1085 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 SPATA31A1Q5TZJ5 1347 aa22.24■■□□□ 1.15
SMARCD2-203ENST00000448276 FLOT1O75955 427 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 PMS2P54278 862 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 MARSP56192 900 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 DR1Q01658 176 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 CRYMQ14894 314 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 SLFN11Q7Z7L1 901 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 CCDC65Q8IXS2 484 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 ANKS4BQ8N8V4 417 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 HES6Q96HZ4 224 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 GPR101Q96P66 508 aaPredicted RBP22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 LRRC27Q9C0I9 530 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 IKZF4Q9H2S9 585 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 PHLPP1O60346 1717 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 C10orf76Q5T2E6 689 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 FBXO25Q8TCJ0 367 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 EPS8L3Q8TE67 593 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 ZDHHC18Q9NUE0 388 aa22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 RTCBQ9Y3I0 505 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-203ENST00000448276 HGSO14964 777 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 KCNQ2O43526 872 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 LDHBP07195 334 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 CASP4P49662 377 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 RPS8P62241 208 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 PIGWQ7Z7B1 504 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 LRRC47Q8N1G4 583 aaKnown RBP22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 SEMA4AQ9H3S1 761 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 ARMCX3Q9UH62 379 aaPredicted RBP22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 AMFRQ9UKV5 643 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 PCDHA12Q9UN75 941 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 A0A1B0GUA9 196 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 A8MUI8 341 aa22.22■■□□□ 1.15
SMARCD2-203ENST00000448276 RTN2O75298 545 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms