RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	ERCC5	P28715	1186 aa	Predicted RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	GUCY1A2	P33402	732 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	DYNLL1	P63167	89 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ST5	P78524	1137 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	FANCC	Q00597	558 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	TROAP	Q12815	778 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	BNIP3	Q12983	259 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	CDK5R2	Q13319	367 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	CACNA1S	Q13698	1873 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	POSTN	Q15063	836 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	PTPN14	Q15678	1187 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	KIAA0319	Q5VV43	1072 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	GALNT17	Q6IS24	598 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	TMC6	Q7Z403	805 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	FILIP1	Q7Z7B0	1213 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	METTL16	Q86W50	562 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	PLD6	Q8N2A8	252 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCDC148	Q8NFR7	591 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ENOX1	Q8TC92	643 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	TBC1D22A	Q8WUA7	517 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	CACTIN	Q8WUQ7	758 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ANKS1A	Q92625	1134 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	RPGR	Q92834	1020 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	RBM17	Q96I25	401 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ROBO3	Q96MS0	1386 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	SYNGAP1	Q96PV0	1343 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	LZTS2	Q9BRK4	669 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	GTPBP4	Q9BZE4	634 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	XPO4	Q9C0E2	1151 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	KAT14	Q9H8E8	782 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZFYVE1	Q9HBF4	777 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	RAD18	Q9NS91	495 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	IFNK	Q9P0W0	207 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	SRP68	Q9UHB9	627 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	NRBP1	Q9UHY1	535 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	ADAMTS6	Q9UKP5	1117 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	KCNJ14	Q9UNX9	436 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	THSD7A	Q9UPZ6	1657 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	TACC3	Q9Y6A5	838 aa		4.59	□□□□□ -1.67
PTPN12-208	ENST00000447995	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	GOLGA6L9	A6NEM1	432 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	POLR2D	O15514	142 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PRDM1	O75626	825 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	BBOX1	O75936	387 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	RNASE1	P07998	156 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	SLFN14	P0C7P3	912 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CDK11B	P21127	795 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	TM4SF1	P30408	202 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	TOB1	P50616	345 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PLCD1	P51178	756 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	UBASH3A	P57075	661 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	NLRP5	P59047	1200 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCZ1B	P86790	482 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCZ1	P86791	482 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	LRMP	Q12912	555 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PNOC	Q13519	176 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MORC3	Q14149	939 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	GRM4	Q14833	912 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	NCAPH	Q15003	741 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF124	Q15973	351 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PKN1	Q16512	942 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PFKFB3	Q16875	520 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC144B	Q3MJ40	725 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CFAP100	Q494V2	611 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	LONRF3	Q496Y0	759 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	TTC38	Q5R3I4	469 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	NT5DC1	Q5TFE4	455 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MEX3C	Q5U5Q3	659 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	C12orf60	Q5U649	245 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPOCD1	Q6ZMY3	1216 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM181A	Q8N9Y4	354 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	IQUB	Q8NA54	791 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	GLIS3	Q8NEA6	775 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	KIF18A	Q8NI77	898 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MISP3	Q96FF7	219 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CLIC6	Q96NY7	704 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	GSDMA	Q96QA5	445 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CTAGE1	Q96RT6	745 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	RC3H2	Q9HBD1	1191 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MKNK2	Q9HBH9	465 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	ABCB6	Q9NP58	842 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	CABP5	Q9NP86	173 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	TCP11L1	Q9NUJ3	509 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	RMND1	Q9NWS8	449 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MCM9	Q9NXL9	1143 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	TFCP2L1	Q9NZI6	479 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	VPS54	Q9P1Q0	977 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	MAN1B1	Q9UKM7	699 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHB6	Q9Y5E3	794 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHA5	Q9Y5H7	936 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	BTAF1	O14981	1849 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	ECM29	Q5VYK3	1845 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	LAMB1	P07942	1786 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	DLEC1	Q9Y238	1755 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms