RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PCDHA2Q9Y5H9 948 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 SOX1O00570 391 aaPredicted RBP13.36□□□□□ -0.27
RFC4-208ENST00000447345 STX6O43752 255 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 FGBP02675 491 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 P4HBP07237 508 aaKnown RBP13.36□□□□□ -0.27
RFC4-208ENST00000447345 CLCN3P51790 818 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 MRPS6P82932 125 aaKnown RBP13.36□□□□□ -0.27
RFC4-208ENST00000447345 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 RESTQ13127 1097 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 GPNMBQ14956 572 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 XKR3Q5GH77 459 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
RFC4-208ENST00000447345 MTMR6Q9Y217 621 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 GINS2Q9Y248 185 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 CDY2AQ9Y6F7 541 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 LAMA3Q16787 3333 aa13.36□□□□□ -0.27
RFC4-208ENST00000447345 MYH11P35749 1972 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 SMIM35A0A1B0GVV1 85 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 M0QZ92 97 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.279e-38■■■■■ 37.8
RFC4-208ENST00000447345 CAND2O75155 1236 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 STBD1O95210 358 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 CHRNA1P02708 482 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 PFKMP08237 780 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 GHRP10912 638 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 ACTN1P12814 892 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 MGAT3Q09327 533 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 ANO5Q75V66 913 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
RFC4-208ENST00000447345 A0A087WWV3 80 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 ZBTB39O15060 712 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 MED24O75448 989 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 VTNP04004 478 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 NPEPPSP55786 919 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 EFCAB12Q6NXP0 572 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 ERMNQ8TAM6 284 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 NEK9Q8TD19 979 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 HERVK_113Q902F9 699 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
RFC4-208ENST00000447345 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 TRPV2Q9Y5S1 764 aa13.34□□□□□ -0.27
RFC4-208ENST00000447345 TCHHQ07283 1943 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 VWA3AA6NCI4 1184 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 PP2D1A8MPX8 630 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 LAD1O00515 517 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 MAGEB2O15479 319 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 SLITRK3O94933 977 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 PARNO95453 639 aaKnown RBP13.33□□□□□ -0.28
RFC4-208ENST00000447345 CXCL10P02778 98 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 FXR1P51114 621 aaKnown RBP eCLIP13.33□□□□□ -0.28
RFC4-208ENST00000447345 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
RFC4-208ENST00000447345 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
RFC4-208ENST00000447345 CEBPZQ03701 1054 aaKnown RBP13.33□□□□□ -0.28
RFC4-208ENST00000447345 DRP2Q13474 957 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
RFC4-208ENST00000447345 IL17AQ16552 155 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 KIZQ2M2Z5 673 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 XKR9Q5GH70 373 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 FAM26DQ5JW98 314 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 IER5Q5VY09 327 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 RPAINQ86UA6 219 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 C4orf19Q8IY42 314 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 KIAA0319LQ8IZA0 1049 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 DBF4BQ8NFT6 615 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 HSD17B14Q9BPX1 270 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
RFC4-208ENST00000447345 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 TMOD1P28289 359 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 PKP1Q13835 747 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 LPIN1Q14693 890 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 FOXD4L6Q3SYB3 417 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms