RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 LARP4BQ92615 738 aaKnown RBP19.41■□□□□ 0.7
SGCE-206ENST00000445866 HAS3O00219 553 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 DNM1LO00429 736 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 ACTN4O43707 911 aaKnown RBP19.4■□□□□ 0.7
SGCE-206ENST00000445866 NBPF20Q3BBV1 942 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 MTERF2Q49AM1 385 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 KRBA2Q6ZNG9 492 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 C7orf31Q8N865 590 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 SYT2Q8N9I0 419 aaPredicted RBP19.4■□□□□ 0.7
SGCE-206ENST00000445866 STAMQ92783 540 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 CYP26B1Q9NR63 512 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 AFMP43652 599 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 RARRES1P49788 294 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 IGBP1P78318 339 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 ZNF484Q5JVG2 852 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 COL13A1Q5TAT6 717 aaPredicted RBP19.4■□□□□ 0.7
SGCE-206ENST00000445866 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 PAGE5Q96GU1 130 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 CCDC34Q96HJ3 373 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 TIGD1Q96MW7 591 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 SETD4Q9NVD3 440 aa19.4■□□□□ 0.7
SGCE-206ENST00000445866 SMIM10L2AP0DMW4 78 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 SMIM10L2BP0DMW5 78 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 SLC12A3P55017 1021 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 AMPD3Q01432 767 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 PPFIA1Q13136 1202 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 PADI6Q6TGC4 694 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 BMP2KQ9NSY1 1161 aaPredicted RBP19.39■□□□□ 0.69
SGCE-206ENST00000445866 KBTBD4Q9NVX7 518 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 PHF24Q9UPV7 400 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 MCM3APO60318 1980 aa19.39■□□□□ 0.69
SGCE-206ENST00000445866 RRN3P2A6NIE6 340 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 TARBP2Q15633 366 aaKnown RBP19.38■□□□□ 0.69
SGCE-206ENST00000445866 SKOR2Q2VWA4 1001 aaPredicted RBP19.38■□□□□ 0.69
SGCE-206ENST00000445866 FAM47CQ5HY64 1035 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 GPBP1Q86WP2 473 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 GRAMD1CQ8IYS0 662 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 TRAPPC12Q8WVT3 735 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 LRRC27Q9C0I9 530 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 MAGEF1Q9HAY2 307 aa19.38■□□□□ 0.69
SGCE-206ENST00000445866 A0A1W2PQ45 241 aaPredicted RBP19.37■□□□□ 0.69
SGCE-206ENST00000445866 A0A1W2PQY0 241 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 ITGA7Q13683 1181 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 GRIK4Q16099 956 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 CAMK4Q16566 473 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 MTRQ99707 1265 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 SENP6Q9GZR1 1112 aaPredicted RBP19.37■□□□□ 0.69
SGCE-206ENST00000445866 STARD7Q9NQZ5 370 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 HOOK1Q9UJC3 728 aaKnown RBP19.37■□□□□ 0.69
SGCE-206ENST00000445866 LRRC37A2A6NM11 1700 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 NRCAMQ92823 1304 aa19.37■□□□□ 0.69
SGCE-206ENST00000445866 ZBTB42B2RXF5 422 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 TRAK2O60296 914 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
SGCE-206ENST00000445866 CAPN2P17655 700 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 TBC1D8BQ0IIM8 1120 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 ARSHQ5FYA8 562 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 RINT1Q6NUQ1 792 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 MAEAQ7L5Y9 396 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 TNMDQ9H2S6 317 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 GRIN2DO15399 1336 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 MYMKA6NI61 221 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 USO1O60763 962 aaKnown RBP19.36■□□□□ 0.69
SGCE-206ENST00000445866 GNAT1P11488 350 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 CYP11B2P19099 503 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 KLRC1P26715 233 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 POLGP54098 1239 aaPredicted RBP19.36■□□□□ 0.69
SGCE-206ENST00000445866 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 C1orf186Q6ZWK4 172 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 DYMQ7RTS9 669 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 EXOC8Q8IYI6 725 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 SLC7A3Q8WY07 619 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 RUSC1Q9BVN2 902 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 POLD4Q9HCU8 107 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 PPME1Q9Y570 386 aa19.36■□□□□ 0.69
SGCE-206ENST00000445866 NPHP3-ACAD11A0A0J9YXS1 232 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 C17orf102A2RUQ5 167 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 DGAT1O75907 488 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 MNX1P50219 401 aaPredicted RBP19.35■□□□□ 0.69
SGCE-206ENST00000445866 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
SGCE-206ENST00000445866 KLHL40Q2TBA0 621 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 NFRKBQ6P4R8 1299 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 SH3RF1Q7Z6J0 888 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 METTL13Q8N6R0 699 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 ANKLE1Q8NAG6 615 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 DDX12PQ92771 950 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 CEP89Q96ST8 783 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 BLZF1Q9H2G9 400 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 SUGCTQ9HAC7 445 aa19.35■□□□□ 0.69
SGCE-206ENST00000445866 MAGEB2O15479 319 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 MAFO75444 373 aaPredicted RBP19.34■□□□□ 0.69
SGCE-206ENST00000445866 CASP1P29466 404 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 RFC5P40937 340 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 ZNF200P98182 395 aaPredicted RBP19.34■□□□□ 0.69
SGCE-206ENST00000445866 MARCH8Q5T0T0 291 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 LMBR1Q8WVP7 490 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 ZBTB10Q96DT7 871 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 C7orf25Q9BPX7 421 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms