RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 PDZD3Q86UT5 571 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 LSM14BQ9BX40 385 aaKnown RBP11.93□□□□□ -0.5
HDAC8-215ENST00000444609 SPG21Q9NZD8 308 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 WDFY3Q8IZQ1 3526 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 TGFB3P10600 412 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
HDAC8-215ENST00000444609 UBA1P22314 1058 aaKnown RBP11.92□□□□□ -0.5
HDAC8-215ENST00000444609 GBP2P32456 591 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-215ENST00000444609 MRPS6P82932 125 aaKnown RBP11.92□□□□□ -0.5
HDAC8-215ENST00000444609 FOXC1Q12948 553 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 C15orf39Q6ZRI6 1047 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 LRRC55Q6ZSA7 311 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 CLDN23Q96B33 292 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 ZNF558Q96NG5 402 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 IL17RBQ9NRM6 502 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 PAG1Q9NWQ8 432 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 CACNA2D2Q9NY47 1150 aa11.92□□□□□ -0.5
HDAC8-215ENST00000444609 FRMPD2Q68DX3 1309 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 TDGF1P13385 188 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 PBX3P40426 434 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 NRLP54845 237 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 PAK2Q13177 524 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 UBXN2BQ14CS0 331 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 PSAPL1Q6NUJ1 521 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 FAM43BQ6ZT52 329 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 BCAS3Q9H6U6 928 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 PXMP2Q9NR77 195 aa11.91□□□□□ -0.5
HDAC8-215ENST00000444609 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-215ENST00000444609 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 ANHXE9PGG2 379 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
HDAC8-215ENST00000444609 NMT2O60551 498 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 FGFR1P11362 822 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 CA8P35219 290 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 NOVP48745 357 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 GPC5P78333 572 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 PRKCQQ04759 706 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 ITPR1Q14643 2758 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 USH1GQ495M9 461 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 AASDHQ4L235 1098 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-215ENST00000444609 IER5Q5VY09 327 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 DENND4AQ7Z401 1863 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 SLC39A11Q8N1S5 342 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-215ENST00000444609 STAMQ92783 540 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 MYADMQ96S97 322 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 EPB41L4AQ9HCS5 686 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-215ENST00000444609 WDR6Q9NNW5 1121 aaKnown RBP11.9□□□□□ -0.5
HDAC8-215ENST00000444609 IRAK3Q9Y616 596 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 DMXL2Q8TDJ6 3036 aa11.9□□□□□ -0.5
HDAC8-215ENST00000444609 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 MBLAC1A4D2B0 266 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 EIF4E1BA6NMX2 242 aaKnown RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 MGEA5O60502 916 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 TOP3BO95985 862 aaKnown RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 RPLP2P05387 115 aaKnown RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 HSPD1P10809 573 aaKnown RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 SIM2Q14190 667 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 CCDC6Q16204 474 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 ZBTB41Q5SVQ8 909 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 STPG1Q5TH74 334 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-215ENST00000444609 SLC24A5Q71RS6 500 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 KLHL5Q96PQ7 755 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 LTB4R2Q9NPC1 389 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 RGS18Q9NS28 235 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 GPSM3Q9Y4H4 160 aa11.89□□□□□ -0.51
HDAC8-215ENST00000444609 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-215ENST00000444609 C9IYK1 514 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 MYCLP12524 364 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-215ENST00000444609 RPS9P46781 194 aaKnown RBP11.88□□□□□ -0.51
HDAC8-215ENST00000444609 TDO2P48775 406 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 FAM189BP81408 668 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 HTR4Q13639 388 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 GIT2Q14161 759 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 WTAPQ15007 396 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 MLF2Q15773 248 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-215ENST00000444609 SLC44A4Q53GD3 710 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 MARCH8Q5T0T0 291 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 C19orf48Q6RUI8 117 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 GLIS3Q8NEA6 775 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 AUTS2Q8WXX7 1259 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
HDAC8-215ENST00000444609 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms