RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 INF2Q27J81 1249 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 ODR4Q5SWX8 454 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 PPP4R3AQ6IN85 833 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 ZNF710Q8N1W2 664 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 ATXN2LQ8WWM7 1075 aaKnown RBP20.55■□□□□ 0.88
VCX3B-203ENST00000444481 SYMPKQ92797 1274 aaKnown RBP20.55■□□□□ 0.88
VCX3B-203ENST00000444481 UNC45AQ9H3U1 944 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 SUGCTQ9HAC7 445 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 THEGQ9P2T0 379 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 DDX25Q9UHL0 483 aaKnown RBP20.55■□□□□ 0.88
VCX3B-203ENST00000444481 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
VCX3B-203ENST00000444481 LPXNO60711 386 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 C22orf31O95567 290 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 OATP04181 439 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 GCFC2P16383 781 aaKnown RBP20.54■□□□□ 0.88
VCX3B-203ENST00000444481 PAK2Q13177 524 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 B3GNT9Q6UX72 402 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 NEK8Q86SG6 692 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 NECAB1Q8N987 351 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 ETNPPLQ8TBG4 499 aa20.54■□□□□ 0.88
VCX3B-203ENST00000444481 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
VCX3B-203ENST00000444481 WDR81Q562E7 1941 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 PRRC2BQ5JSZ5 2229 aaKnown RBP20.53■□□□□ 0.88
VCX3B-203ENST00000444481 CUL9Q8IWT3 2517 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 RBAK-RBAKDNI3L0D1 243 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 CHMP2AO43633 222 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
VCX3B-203ENST00000444481 LETM2Q2VYF4 491 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 TJAP1Q5JTD0 557 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 MIER3Q7Z3K6 550 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 MICALL1Q8N3F8 863 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 FAM20AQ96MK3 541 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 MTUS1Q9ULD2 1270 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 EVPLQ92817 2033 aa20.53■□□□□ 0.88
VCX3B-203ENST00000444481 ZNF862O60290 1169 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 LARGE1O95461 756 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 TMOD1P28289 359 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
VCX3B-203ENST00000444481 METTL13Q8N6R0 699 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.88
VCX3B-203ENST00000444481 FBXO22Q8NEZ5 403 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 C17orf80Q9BSJ5 609 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 PRDM6Q9NQX0 595 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 TTC3P53804 2025 aa20.52■□□□□ 0.88
VCX3B-203ENST00000444481 TBX3O15119 743 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 RPS6KA5O75582 802 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 KRT2P35908 639 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 CRYBB1P53674 252 aaPredicted RBP20.51■□□□□ 0.87
VCX3B-203ENST00000444481 PRKCEQ02156 737 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 PIK3AP1Q6ZUJ8 805 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 FIBCD1Q8N539 461 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 OXER1Q8TDS5 423 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 GDPD5Q8WTR4 605 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 GJA10Q969M2 543 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 KCNMB3Q9NPA1 279 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 GJB4Q9NTQ9 266 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
VCX3B-203ENST00000444481 RWDD3Q9Y3V2 267 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 LOXHD1Q8IVV2 1947 aa20.51■□□□□ 0.87
VCX3B-203ENST00000444481 GPR182O15218 404 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 STAG3L1P0CL83 205 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 MRPS5P82675 430 aaKnown RBP20.5■□□□□ 0.87
VCX3B-203ENST00000444481 EPC2Q52LR7 807 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 XKR3Q5GH77 459 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 EFCAB12Q6NXP0 572 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 RTN4RL1Q86UN2 441 aaPredicted RBP20.5■□□□□ 0.87
VCX3B-203ENST00000444481 LINC01465Q8N7H1 131 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 LINC01599Q8WXQ3 324 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 ZNF689Q96CS4 500 aaPredicted RBP20.5■□□□□ 0.87
VCX3B-203ENST00000444481 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 RC3H2Q9HBD1 1191 aaKnown RBP20.5■□□□□ 0.87
VCX3B-203ENST00000444481 COG5Q9UP83 839 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 GINS2Q9Y248 185 aa20.5■□□□□ 0.87
VCX3B-203ENST00000444481 COL4A4P53420 1690 aaPredicted RBP20.5■□□□□ 0.87
VCX3B-203ENST00000444481 SLC37A4O43826 429 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 CCNT1O60563 726 aaKnown RBP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 DKC1O60832 514 aaKnown RBP eCLIP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 DGKIO75912 1065 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 NFX1Q12986 1120 aaKnown RBP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 PPP2R5CQ13362 524 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 TRIM29Q14134 588 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 UGCGQ16739 394 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 KRT40Q6A162 431 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 NPAS4Q8IUM7 802 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 CRIPAKQ8N1N5 446 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 ASB2Q96Q27 587 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 NIFKQ9BYG3 293 aaKnown RBP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 CDHR5Q9HBB8 845 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 ERVK-5Q9HDB9 667 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 NOC2LQ9Y3T9 749 aaKnown RBP20.49■□□□□ 0.87
VCX3B-203ENST00000444481 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
VCX3B-203ENST00000444481 VCANP13611 3396 aa20.48■□□□□ 0.87
VCX3B-203ENST00000444481 H3BNC9 293 aa20.48■□□□□ 0.87
VCX3B-203ENST00000444481 GPR32O75388 356 aa20.48■□□□□ 0.87
VCX3B-203ENST00000444481 MMP1P03956 469 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms