RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 EIF2AK1Q9BQI3 630 aaKnown RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 MSTO1Q9BUK6 570 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 HERC5Q9UII4 1024 aaKnown RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 CNGA1P29973 690 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 PPM1FP49593 454 aaPredicted RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 GYS2P54840 703 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 ADCY1Q08828 1119 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 SEMA3FQ13275 785 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 MAP7D3Q8IWC1 876 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 ARHGEF28Q8N1W1 1705 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 NDUFB10O96000 172 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 C16orf86Q6ZW13 317 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 RHOT2Q8IXI1 618 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 RAB3IL1Q8TBN0 382 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 HAUS1Q96CS2 278 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 PDHBP11177 359 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 SLCO1A2P46721 670 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 QARSP47897 775 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 LMNB2Q03252 620 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 LXNQ9BS40 222 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 EIF3CLB5ME19 914 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 TLR3O15455 904 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 SARNPP82979 210 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 NNTQ13423 1086 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 NFRKBQ6P4R8 1299 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 MCPH1Q8NEM0 835 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 FMO2Q99518 471 aa24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 EIF3CQ99613 913 aaKnown RBP24.22■■□□□ 1.47
CTDSPL-206ENST00000443503 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 STXBP3O00186 592 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 CIB2O75838 187 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 EMBQ6PCB8 327 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 SCARA5Q6ZMJ2 495 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 VPS52Q8N1B4 723 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 ATP2A3Q93084 1043 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 CAPN11Q9UMQ6 739 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 SPATA31A5Q5VU36 1347 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 SPATA31A7Q8IWB4 1347 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 NCK2O43639 380 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 P4HBP07237 508 aaKnown RBP24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 TRIM49P0CI25 452 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 TRIM49CP0CI26 452 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 TRIP13Q15645 432 aaPredicted RBP24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 EXOC4Q96A65 974 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 MAD1L1Q9Y6D9 718 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 TROVE2P10155 538 aaKnown RBP eCLIP24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 DYNLT1P63172 113 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 CDC42EP5Q6NZY7 148 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 THNSL1Q8IYQ7 743 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 WHAMMQ8TF30 809 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 ANAPC4Q9UJX5 808 aa24.21■■□□□ 1.47
CTDSPL-206ENST00000443503 CASP7P55210 303 aa24.2■■□□□ 1.47
CTDSPL-206ENST00000443503 YWHAGP61981 247 aaKnown RBP eCLIP24.2■■□□□ 1.47
CTDSPL-206ENST00000443503 TBC1D31Q96DN5 1066 aa24.2■■□□□ 1.47
CTDSPL-206ENST00000443503 RSRC1Q96IZ7 334 aaKnown RBP24.2■■□□□ 1.47
CTDSPL-206ENST00000443503 LRRD1A4D1F6 860 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 DR1Q01658 176 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 IFRD2Q12894 506 aaPredicted RBP24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 CEP55Q53EZ4 464 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 LDHDQ86WU2 507 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 KRT1P04264 644 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 KRT76Q01546 638 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 BARGINQ6ZT62 677 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 RFX6Q8HWS3 928 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 C7orf31Q8N865 590 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 RILPQ96NA2 401 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 RHOBTB3O94955 611 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 PTPAQ15257 358 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 STRIP1Q5VSL9 837 aa24.2■■□□□ 1.46
CTDSPL-206ENST00000443503 ZBTB7AO95365 584 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 ABCD1P33897 745 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 ZNF394Q53GI3 561 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 SDCCAG8Q86SQ7 713 aaPredicted RBP24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 SMC1BQ8NDV3 1235 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 CCDC188H7C350 402 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 Q3C1V9 767 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 NME8Q8N427 588 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 GABPB2Q8TAK5 448 aaPredicted RBP24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 NSUN6Q8TEA1 469 aaKnown RBP24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 CALN1Q9BXU9 219 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 SEL1LQ9UBV2 794 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 DENND3A2RUS2 1198 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 OSBPP22059 807 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 DMTNQ08495 405 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 DRAP1Q14919 205 aaPredicted RBP24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 NR1I3Q14994 352 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 STK38LQ9Y2H1 464 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 NAA25Q14CX7 972 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 ANAPC5Q9UJX4 755 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 NUB1Q9Y5A7 615 aa24.19■■□□□ 1.46
CTDSPL-206ENST00000443503 CNTNAP4Q9C0A0 1308 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 GSPT2Q8IYD1 628 aaKnown RBP24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 NPHP3-ACAD11A0A0J9YXS1 232 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 MYMKA6NI61 221 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 FGFR2P21802 821 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 TC2NQ8N9U0 490 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 NEK9Q8TD19 979 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 OSBPL9Q96SU4 736 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 SEPT10Q9P0V9 454 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms