RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 DENND3A2RUS2 1198 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 PI15O43692 258 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 FGFR1P11362 822 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 AOC1P19801 751 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 PDE4AP27815 886 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 MTHFRP42898 656 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 IMMTQ16891 758 aaKnown RBP16.02■□□□□ 0.16
LINC00642-202ENST00000442515 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 RGS18Q9NS28 235 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 C1orf112Q9NSG2 853 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 GINS2Q9Y248 185 aa16.02■□□□□ 0.16
LINC00642-202ENST00000442515 DOCK5Q9H7D0 1870 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 C9IYK1 514 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 KRT37O76014 449 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 NPR3P17342 541 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 ITGB5P18084 799 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 PBX3P40426 434 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 SLC24A5Q71RS6 500 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 KCNG4Q8TDN1 519 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 CUL5Q93034 780 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 ATP6V0A4Q9HBG4 840 aa16.01■□□□□ 0.15
LINC00642-202ENST00000442515 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
LINC00642-202ENST00000442515 NOC2LQ9Y3T9 749 aaKnown RBP16.01■□□□□ 0.15
LINC00642-202ENST00000442515 SMIM35A0A1B0GVV1 85 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 MEIS2O14770 477 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 LMNAP02545 664 aaKnown RBP16■□□□□ 0.15
LINC00642-202ENST00000442515 SDSP20132 328 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 PLCB4Q15147 1175 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 RARS2Q5T160 578 aaKnown RBP16■□□□□ 0.15
LINC00642-202ENST00000442515 CYB5R4Q7L1T6 521 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 TMC7Q7Z402 723 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 NME8Q8N427 588 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 DTWD2Q8NBA8 298 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 TMEM161AQ9NX61 479 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 ST3GAL5Q9UNP4 418 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 LAMA4Q16363 1823 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 CFAP47Q6ZTR5 3102 aa16■□□□□ 0.15
LINC00642-202ENST00000442515 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 PPM1AP35813 382 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 MTMR1Q13613 665 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 KIAA1841Q6NSI8 718 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 KCNT2Q6UVM3 1135 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 LRRC55Q6ZSA7 311 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 C12orf76Q8N812 135 aaPredicted RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 MRPL43Q8N983 215 aaKnown RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 ZNF558Q96NG5 402 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 AZI2Q9H6S1 392 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 JPH1Q9HDC5 661 aaPredicted RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
LINC00642-202ENST00000442515 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
LINC00642-202ENST00000442515 C2orf71A6NGG8 1288 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 CLASP2O75122 1294 aaKnown RBP15.98■□□□□ 0.15
LINC00642-202ENST00000442515 EOMESO95936 686 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 KRT17Q04695 432 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 PUM1Q14671 1186 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC00642-202ENST00000442515 MTHFD1LQ6UB35 978 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
LINC00642-202ENST00000442515 FAM43BQ6ZT52 329 aaPredicted RBP15.98■□□□□ 0.15
LINC00642-202ENST00000442515 LRRC43Q8N309 656 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 CNTNAP3BQ96NU0 1288 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 RTP3Q9BQQ7 232 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 DSCC1Q9BVC3 393 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 CNTNAP3Q9BZ76 1288 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 CDHR5Q9HBB8 845 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 SENP2Q9HC62 589 aa15.98■□□□□ 0.15
LINC00642-202ENST00000442515 FAM189BP81408 668 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 TROAPQ12815 778 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 KANK3Q6NY19 840 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 CASD1Q96PB1 797 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 SEMA4AQ9H3S1 761 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 ELAC1Q9H777 363 aaKnown RBP15.97■□□□□ 0.15
LINC00642-202ENST00000442515 CYP26B1Q9NR63 512 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 RNF19AQ9NV58 838 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 SPG21Q9NZD8 308 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 SLC9A2Q9UBY0 812 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 DUSP12Q9UNI6 340 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 UBIAD1Q9Y5Z9 338 aa15.97■□□□□ 0.15
LINC00642-202ENST00000442515 KAT6AQ92794 2004 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 TPRP12270 2363 aaKnown RBP15.96■□□□□ 0.15
LINC00642-202ENST00000442515 GPR182O15218 404 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 CA8P35219 290 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 ATAT1Q5SQI0 421 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 ODR4Q5SWX8 454 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 PLPPR4Q7Z2D5 763 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 FAM228AQ86W67 206 aa15.96■□□□□ 0.15
LINC00642-202ENST00000442515 SIX5Q8N196 739 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms