RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LXNQ9BS40 222 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 RAB34Q9BZG1 259 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 SQORQ9Y6N5 450 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 POTEMA6NI47 508 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 M0QZ92 97 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 STX6O43752 255 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 NBNO60934 754 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 BAIAP3O94812 1187 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 SLITRK3O94933 977 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 BMP15O95972 392 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 TECP42680 631 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 MGAT3Q09327 533 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 NBR1Q14596 966 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 FAM43BQ6ZT52 329 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 OTUD6AQ7L8S5 288 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 TRMT1LQ7Z2T5 733 aaKnown RBP16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 EXOC8Q8IYI6 725 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 CEP89Q96ST8 783 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 SEPT9Q9UHD8 586 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
CSNK1E-210ENST00000442216 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 EFCAB14O75071 495 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 CHRNA1P02708 482 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 MUTP22033 750 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 TMOD1P28289 359 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 MRPS6P82932 125 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 TBC1D8BQ0IIM8 1120 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 MBTPS1Q14703 1052 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 ANO5Q75V66 913 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 KIAA0319LQ8IZA0 1049 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 LINC01465Q8N7H1 131 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 IGSF22Q8N9C0 903 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 FAM49AQ9H0Q0 323 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 TUFT1Q9NNX1 390 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 RGL1Q9NZL6 768 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 MTMR6Q9Y217 621 aa16.84■□□□□ 0.29
CSNK1E-210ENST00000442216 IGKV6-21A0A0C4DH24 114 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 CTSHP09668 335 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 CYP4A11Q02928 519 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 CTTNQ14247 550 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 MTERF2Q49AM1 385 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 PLEKHG4Q58EX7 1191 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 EFCAB12Q6NXP0 572 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 DTHD1Q6ZMT9 781 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 FERMT3Q86UX7 667 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 TPH2Q8IWU9 490 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 GBF1Q92538 1859 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 APBB2Q92870 758 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 ZBTB10Q96DT7 871 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 CYP26B1Q9NR63 512 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 TRPV2Q9Y5S1 764 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 CDY2AQ9Y6F7 541 aa16.83■□□□□ 0.28
CSNK1E-210ENST00000442216 PTPRSQ13332 1948 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 ABHD14A-ACY1A0A1B0GW23 586 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 MAFO75444 373 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 RPA1P27694 616 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 RESTQ13127 1097 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 METTL13Q8N6R0 699 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 CELF4Q9BZC1 486 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 ANKEF1Q9NU02 776 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 LRWD1Q9UFC0 647 aa16.82■□□□□ 0.28
CSNK1E-210ENST00000442216 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 RFC5P40937 340 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 SMAD3P84022 425 aaKnown RBP16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 IKBKEQ14164 716 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 BECN1Q14457 450 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 FBXO47Q5MNV8 452 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 SEPT8Q92599 483 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 CEP170P1Q96L14 293 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
CSNK1E-210ENST00000442216 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 DNM2P50570 870 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 FXR1P51114 621 aaKnown RBP eCLIP16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 CLCN3P51790 818 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 PLA2G4FQ68DD2 849 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 TSHZ1Q6ZSZ6 1077 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms