RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 FAM160B1Q5W0V3 765 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 CRYGNQ8WXF5 182 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 FTHL17Q9BXU8 183 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
ITGB1-207ENST00000439974 RC3H2Q9HBD1 1191 aaKnown RBP18.18■□□□□ 0.5
ITGB1-207ENST00000439974 SH2B1Q9NRF2 756 aaPredicted RBP18.18■□□□□ 0.5
ITGB1-207ENST00000439974 RWDD3Q9Y3V2 267 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 IGLV3-22A0A075B6J6 115 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 HBP1O60381 514 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 CTNNB1P35222 781 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
ITGB1-207ENST00000439974 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 MIS18BP1Q6P0N0 1132 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 MTHFD1LQ6UB35 978 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 NME8Q8N427 588 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 ATP8B4Q8TF62 1192 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 CELF4Q9BZC1 486 aaKnown RBP18.17■□□□□ 0.5
ITGB1-207ENST00000439974 IGSF9BQ9UPX0 1349 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
ITGB1-207ENST00000439974 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 C5orf67F2Z3F1 127 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 M0R2N6 131 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
ITGB1-207ENST00000439974 DHX15O43143 795 aaKnown RBP18.16■□□□□ 0.5
ITGB1-207ENST00000439974 RB1P06400 928 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 KCNA5P22460 613 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 PAK2Q13177 524 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 LEXMQ3ZCV2 418 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
ITGB1-207ENST00000439974 CCDC60Q8IWA6 550 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-207ENST00000439974 DAGLBQ8NCG7 672 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 TBCKQ8TEA7 893 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 LINC01599Q8WXQ3 324 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 WASF1Q92558 559 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-207ENST00000439974 ZNF577Q9BSK1 485 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 ZNF302Q9NR11 478 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 COL1A2P08123 1366 aa18.16■□□□□ 0.5
ITGB1-207ENST00000439974 DGKIO75912 1065 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 LINC00271P0C7V0 271 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 XBP1P17861 261 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 KLRC1P26715 233 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 BMPR1AP36894 532 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 KRT76Q01546 638 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 NR5A1Q13285 461 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-207ENST00000439974 PDXDC2PQ6P474 469 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 CLP1Q92989 425 aaKnown RBP18.15■□□□□ 0.5
ITGB1-207ENST00000439974 C11orf84Q9BUA3 381 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-207ENST00000439974 NSUN3Q9H649 340 aaKnown RBP18.15■□□□□ 0.5
ITGB1-207ENST00000439974 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 PADI3Q9ULW8 664 aa18.15■□□□□ 0.5
ITGB1-207ENST00000439974 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
ITGB1-207ENST00000439974 COL9A1P20849 921 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 INF2Q27J81 1249 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 PRR16Q569H4 304 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 TCEAL5Q5H9L2 206 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 ZNF484Q5JVG2 852 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 ZNF746Q6NUN9 644 aaPredicted RBP18.14■□□□□ 0.49
ITGB1-207ENST00000439974 SWSAP1Q6NVH7 229 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 RTN4RL1Q86UN2 441 aaPredicted RBP18.14■□□□□ 0.49
ITGB1-207ENST00000439974 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 GJA10Q969M2 543 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
ITGB1-207ENST00000439974 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 LMAN2LQ9H0V9 348 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 EVPLQ92817 2033 aa18.14■□□□□ 0.49
ITGB1-207ENST00000439974 TDP2O95551 362 aa18.13■□□□□ 0.49
ITGB1-207ENST00000439974 STAG3L1P0CL83 205 aa18.13■□□□□ 0.49
ITGB1-207ENST00000439974 CIITAP33076 1130 aa18.13■□□□□ 0.49
ITGB1-207ENST00000439974 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
ITGB1-207ENST00000439974 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
ITGB1-207ENST00000439974 SMAP1Q8IYB5 467 aaPredicted RBP18.13■□□□□ 0.49
ITGB1-207ENST00000439974 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
ITGB1-207ENST00000439974 CCDC194A0A1B0GVG4 234 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 ATP4AP20648 1035 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 KRT2P35908 639 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 TRIM29Q14134 588 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 NONOQ15233 471 aaKnown RBP eCLIP18.12■□□□□ 0.49
ITGB1-207ENST00000439974 GALNT17Q6IS24 598 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 CKAP2LQ8IYA6 745 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 CMTR2Q8IYT2 770 aaKnown RBP18.12■□□□□ 0.49
ITGB1-207ENST00000439974 KIAA0319LQ8IZA0 1049 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 CRIPAKQ8N1N5 446 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 FAM184AQ8NB25 1140 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 NEK9Q8TD19 979 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 BBXQ8WY36 941 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-207ENST00000439974 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
ITGB1-207ENST00000439974 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 GINS2Q9Y248 185 aa18.12■□□□□ 0.49
ITGB1-207ENST00000439974 PCDHA10Q9Y5I2 948 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms