RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 KIAA0319LQ8IZA0 1049 aa11.75□□□□□ -0.53
UBE2F-213ENST00000439780 LINC01465Q8N7H1 131 aa11.75□□□□□ -0.53
UBE2F-213ENST00000439780 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
UBE2F-213ENST00000439780 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
UBE2F-213ENST00000439780 LXNQ9BS40 222 aa11.75□□□□□ -0.53
UBE2F-213ENST00000439780 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
UBE2F-213ENST00000439780 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
UBE2F-213ENST00000439780 TET1Q8NFU7 2136 aa11.75□□□□□ -0.53
UBE2F-213ENST00000439780 SMIM35A0A1B0GVV1 85 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 A0A1W2PPC1 479 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 SOX1O00570 391 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 MED24O75448 989 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 FGBP02675 491 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 CXCL10P02778 98 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 RFC2P35250 354 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 ATP2C1P98194 919 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 TMEM62Q0P6H9 643 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 PKP1Q13835 747 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 MTERF2Q49AM1 385 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 OTOP2Q7RTS6 562 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
UBE2F-213ENST00000439780 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-213ENST00000439780 PP2D1A8MPX8 630 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CAND2O75155 1236 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 LYPLA2O95372 231 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CDC25AP30304 524 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 PRPHP41219 470 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CLCN3P51790 818 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 DRP2Q13474 957 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 ECM1Q16610 540 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 FAM109BQ6ICB4 259 aaPredicted RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 EFCAB12Q6NXP0 572 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CATSPER3Q86XQ3 398 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 LRRC71Q8N4P6 559 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 IGSF22Q8N9C0 903 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 HERVK_113Q902F9 699 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CYP26B1Q9NR63 512 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CLIC4Q9Y696 253 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 CDY2AQ9Y6F7 541 aa11.73□□□□□ -0.53
UBE2F-213ENST00000439780 EVPLQ92817 2033 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 SIP14410 1827 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 LAMA3Q16787 3333 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 IGKV6-21A0A0C4DH24 114 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 LAD1O00515 517 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 MAGEB2O15479 319 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 VTNP04004 478 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 YWHABP31946 246 aaKnown RBP11.72□□□□□ -0.53
UBE2F-213ENST00000439780 GRIN1Q05586 938 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 PDIA5Q14554 519 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 LPIN1Q14693 890 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 PTPAQ15257 358 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 SF3A1Q15459 793 aaKnown RBP11.72□□□□□ -0.53
UBE2F-213ENST00000439780 TMEM266Q2M3C6 531 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 LRIT3Q3SXY7 679 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 NME8Q8N427 588 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 DBF4BQ8NFT6 615 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
UBE2F-213ENST00000439780 POLR3CQ9BUI4 534 aaPredicted RBP11.72□□□□□ -0.53
UBE2F-213ENST00000439780 AGO3Q9H9G7 860 aaKnown RBP11.72□□□□□ -0.53
UBE2F-213ENST00000439780 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
UBE2F-213ENST00000439780 VWA3AA6NCI4 1184 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 DKC1O60832 514 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 GPR32O75388 356 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 MAFO75444 373 aaPredicted RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 PFKMP08237 780 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 GHRP10912 638 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 RPA1P27694 616 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 TBC1D8BQ0IIM8 1120 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 XKR9Q5GH70 373 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 FBXO47Q5MNV8 452 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 DTHD1Q6ZMT9 781 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
UBE2F-213ENST00000439780 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
UBE2F-213ENST00000439780 CEP170P1Q96L14 293 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms