RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MCF2L2Q86YR7 1114 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 MYO1HQ8N1T3 1032 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 GBP7Q8N8V2 638 aaPredicted RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 USP33Q8TEY7 942 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ZMAT2Q96NC0 199 aaKnown RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 GBP5Q96PP8 586 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ISCA1Q9BUE6 129 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 AASDHPPTQ9NRN7 309 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ADAMTS1Q9UHI8 967 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 SNX12Q9UMY4 172 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PCDHA12Q9UN75 941 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 PLAAQ9Y263 795 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 STK38LQ9Y2H1 464 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 MRPL11Q9Y3B7 192 aaKnown RBP6.87□□□□□ -1.31
BDNF-211ENST00000439476 SALL1Q9NSC2 1324 aa6.87□□□□□ -1.31
BDNF-211ENST00000439476 ITSN1Q15811 1721 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 CTNND1O60716 968 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 SERPING1P05155 500 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ZNF18P17022 549 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 SLC12A2P55011 1212 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 DHX9Q08211 1270 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 WDR93Q6P2C0 686 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 FAM133AQ8N9E0 248 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 SLC43A3Q8NBI5 491 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ZCWPW1Q9H0M4 648 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ATP8A1Q9Y2Q0 1164 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 LRRC53A6NM62 1247 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 GOLGA8CPA6NN73 597 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 EIF3HO15372 352 aaKnown RBP eCLIP6.86□□□□□ -1.31
BDNF-211ENST00000439476 HSPA8P11142 646 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 COPB2P35606 906 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 IFNAR2P48551 515 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ERVK-24P63145 666 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 IL9RQ01113 521 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 TBX2Q13207 712 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 ALCAMQ13740 583 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 TNFAIP1Q13829 316 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 HLFQ16534 295 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 FOXR1Q6PIV2 292 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 MAP7D3Q8IWC1 876 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 SAMD3Q8N6K7 520 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 BTG4Q9NY30 223 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 TMEM131LA2VDJ0 1609 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PP2D1A8MPX8 630 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 F8VZ95 297 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 GAS7O60861 476 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PALMO75781 387 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 CD44P16070 742 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 ALDH1B1P30837 517 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 GARSP41250 739 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 PFKFB3Q16875 520 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 ARHGAP44Q17R89 818 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ANKRD35Q8N283 1001 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 RSAD2Q8WXG1 361 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 CDKL2Q92772 493 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PMM1Q92871 262 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 INTS9Q9NV88 658 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 TFR2Q9UP52 801 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 TECPR2O15040 1411 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 SART1O43290 800 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 RTN3O95197 1032 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 RPS8P62241 208 aaKnown RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 GUCY1A3Q02108 690 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 GFPT1Q06210 699 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 EXOC3L4Q17RC7 722 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 GEN1Q17RS7 908 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ASPRV1Q53RT3 343 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 LMBRD2Q68DH5 695 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 HIBCHQ6NVY1 386 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 PALM2Q8IXS6 379 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 ADSSL1Q8N142 457 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 SH2D3CQ8N5H7 860 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 TBCKQ8TEA7 893 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 AP1M1Q9BXS5 423 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 BRD8Q9H0E9 1235 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 RSPH9Q9H1X1 276 aaPredicted RBP6.86□□□□□ -1.31
BDNF-211ENST00000439476 MCM8Q9UJA3 840 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 MID2Q9UJV3 735 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 RAB21Q9UL25 225 aa6.86□□□□□ -1.31
BDNF-211ENST00000439476 PREX1Q8TCU6 1659 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 DNAJC8O75937 253 aaPredicted RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 PRPF6O94906 941 aaKnown RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 STMN1P16949 149 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 ATICP31939 592 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TOB1P50616 345 aaPredicted RBP6.85□□□□□ -1.31
BDNF-211ENST00000439476 PDE6CP51160 858 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 LRRC63Q05C16 580 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 TAF12Q16514 161 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 ZBTB8OSQ8IWT0 167 aa6.85□□□□□ -1.31
BDNF-211ENST00000439476 FLAD1Q8NFF5 587 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms