RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 ZNF444Q8N0Y2 327 aaPredicted RBP10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 MUC3BQ9H195 1237 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 UPF3AQ9H1J1 476 aaKnown RBP10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 NKX2-4Q9H2Z4 354 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 BOLA2Q9H3K6 86 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 ARPP21Q9UBL0 812 aaPredicted RBP10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 CLIP2Q9UDT6 1046 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 TRIM33Q9UPN9 1127 aa10.37□□□□□ -0.75
LSMEM1-202ENST00000439068 CYP2D7A0A087X1C5 515 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 CD4P01730 458 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 VSIG8P0DPA2 414 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 ATP5JP18859 108 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 ITGA7Q13683 1181 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 PCSK7Q16549 785 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 ARMCX2Q7L311 632 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 OTOP2Q7RTS6 562 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 CCDC144CPQ8IYA2 1237 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 LPIN3Q9BQK8 851 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 LACRTQ9GZZ8 138 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 CHMP4BQ9H444 224 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 RAVER2Q9HCJ3 691 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 SRA1Q9HD15 236 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 DDX41Q9UJV9 622 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 ISY1Q9ULR0 285 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 RIPK3Q9Y572 518 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 ZNFX1Q9P2E3 1918 aaKnown RBP10.36□□□□□ -0.75
LSMEM1-202ENST00000439068 NCOR1O75376 2440 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 MYADML2A6NDP7 307 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 MINDY4BA8MYZ0 360 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 NDUFB10O96000 172 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 PFKMP08237 780 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 ACTN1P12814 892 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 ITPKAP23677 461 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 NKX3-2P78367 333 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 IQSEC1Q6DN90 963 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 PSAPL1Q6NUJ1 521 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 GIMAP6Q6P9H5 292 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 C1orf229Q6ZS94 237 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 HS2ST1Q7LGA3 356 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 CHURC1Q8WUH1 139 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 NUDT8Q8WV74 236 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 HAUS7Q99871 368 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 TGIF2Q9GZN2 237 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 RBSNQ9H1K0 784 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 SLC38A10Q9HBR0 1119 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 SYNPO2Q9UMS6 1093 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 Q9Y3F1 56 aa10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 MYO5AQ9Y4I1 1855 aaKnown RBP10.35□□□□□ -0.75
LSMEM1-202ENST00000439068 ELOA3CA0A087WX78 387 aaPredicted RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ELOA3DA6NLF2 546 aaPredicted RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 KIF28PB7ZC32 967 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 SMNDC1O75940 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 TTLL1O95922 423 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ATP2A2P16615 1042 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 CCL23P55773 120 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 BEX3Q00994 111 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 NFX1Q12986 1120 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ELOA3BQ3SY89 546 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 TMEM67Q5HYA8 995 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ERMP1Q7Z2K6 904 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ELOA3Q8NG57 546 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 MKL1Q969V6 931 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 CCSER2Q9H7U1 834 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 HOMER2Q9NSB8 354 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 COG5Q9UP83 839 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 STARD13Q9Y3M8 1113 aa10.34□□□□□ -0.75
LSMEM1-202ENST00000439068 MUC3AQ02505 3323 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 ERC2O15083 957 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 APPP05067 770 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 CELA3AP09093 270 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 RLBP1P12271 317 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 BMP3P12645 472 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 GNAT2P19087 354 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 LRRFIP1Q32MZ4 808 aaKnown RBP10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 TLK2Q86UE8 772 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 FAM160B2Q86V87 743 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 STK11IPQ8N1F8 1099 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 ACDQ96AP0 544 aa10.33□□□□□ -0.76
LSMEM1-202ENST00000439068 KBTBD4Q9NVX7 518 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms